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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

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EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:105.3 nTPM
GTEx:162.6 nTPM
FANTOM5:311.3 Scaled Tags Per Million
Pig:191.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.3
Sample id Sample description nTPM
Putamen
nTPM: 105.3
2482 Female, age 94, left hemisphere 142.2
1937 Female, age 91, right hemisphere 117.3
1829 Male, age 74, unknown 106.7
1838 Male, age 80, right hemisphere 100.4
2466 Female, age 79, unknown 99.4
2489 Female, age 72, unknown 86.1
2647 Male, age 75, left hemisphere 84.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

162.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 162.6
Samples: 254

Max nTPM: 326.3
Min nTPM: 74.8
Std nTPM: 41.8
Median nTPM: 157.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 326.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 325.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 283.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 282.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 281.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 274.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 270.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 261.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 252.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 247.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 245.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 245.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 235.5
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 234.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 232.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 231.3
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 225.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 220.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 220.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 219.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 219.5
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 218.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 218.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 214.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 214.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 212.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 212.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 212.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 212.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 211.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 210.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 210.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 209.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 208.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 208.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 208.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 207.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 205.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 204.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 204.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 203.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 202.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 202.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 202.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 200.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 200.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 200.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 200.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 199.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 199.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 199.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 199.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 197.3
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 196.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 196.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 195.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 195.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 192.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 190.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 189.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 189.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 188.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 188.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 188.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 187.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 185.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 185.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 183.9
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 183.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 182.6
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 182.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 182.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 181.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 180.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 180.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 180.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 179.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 178.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 177.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 175.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 174.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 173.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 172.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 172.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 172.2
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 171.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 171.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 170.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 170.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 169.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 168.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 167.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 167.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 167.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 166.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 166.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 165.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 165.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 164.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 164.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 164.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 164.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 164.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 163.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 163.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 163.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 162.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 162.6
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 162.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 162.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 161.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 161.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 161.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 161.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 161.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 160.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 160.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 160.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 160.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 159.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 158.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 158.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 158.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 158.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 158.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 157.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 157.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 157.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 156.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 156.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 156.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 156.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 156.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 155.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 155.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 154.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 154.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 154.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 153.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 153.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 153.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 153.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 152.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 152.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 152.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 150.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 150.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 150.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 148.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 147.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 147.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 146.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 146.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 145.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 145.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 145.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 145.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 144.9
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 144.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 144.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 144.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 144.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 143.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 143.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 142.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 142.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 142.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 141.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 141.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 140.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 139.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 139.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 139.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 139.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 138.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 138.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 138.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 137.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 137.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 137.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 136.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 136.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 135.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 134.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 134.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 134.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 134.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 134.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 134.1
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 134.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 134.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 133.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 133.8
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 133.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 132.8
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 132.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 132.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 132.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 131.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 130.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 130.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 129.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 129.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 127.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 126.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 125.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 125.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 125.3
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 125.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 124.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 123.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 123.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 123.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 122.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 122.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 122.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 120.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 120.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 120.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 120.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 120.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 119.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 119.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 118.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 118.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 117.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 117.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 116.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 115.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 115.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 114.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 113.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 113.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 113.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 112.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 111.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 111.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 109.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 107.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 107.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 107.6
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 106.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 103.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 101.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 101.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 100.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 100.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 98.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 97.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 96.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 93.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 92.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 79.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 74.8
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

311.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 311.3
FF:10176-103C5 60 years, female 311.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.1
Pig sample Sample description nTPM
Putamen
nTPM: 191.0
Samples: 3

Max nTPM: 227.6
Min nTPM: 134.1
Sample B Female 134.1
Sample C Male 227.6
Sample D Male 211.4

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