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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • CELL LINE

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EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:209.6 nTPM
GTEx:198.5 nTPM
FANTOM5:153.6 Scaled Tags Per Million
Macaque:106.1 nTPM
Pig:120.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

209.6
Sample id Sample description nTPM
Putamen
nTPM: 209.6
2489 Female, age 72, unknown 247.7
2647 Male, age 75, left hemisphere 236.8
1829 Male, age 74, unknown 219.9
1838 Male, age 80, right hemisphere 217.3
2466 Female, age 79, unknown 201.8
1937 Female, age 91, right hemisphere 178.5
2482 Female, age 94, left hemisphere 165.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

198.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 198.5
Samples: 254

Max nTPM: 421.0
Min nTPM: 55.5
Std nTPM: 58.7
Median nTPM: 192.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 421.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 418.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 380.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 366.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 355.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 345.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 343.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 335.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 333.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 332.3
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 323.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 322.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 318.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 315.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 308.1
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 306.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 300.4
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 283.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 282.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 282.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 280.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 276.9
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 274.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 273.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 273.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 268.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 266.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 266.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 263.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 262.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 262.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 262.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 259.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 259.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 258.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 257.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 253.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 252.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 251.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 251.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 249.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 247.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 245.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 245.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 244.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 243.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 243.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 241.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 241.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 238.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 238.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 238.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 237.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 236.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 236.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 233.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 232.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 232.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 232.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 231.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 230.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 228.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 227.5
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 226.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 225.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 224.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 223.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 222.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 222.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 221.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 221.4
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 221.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 221.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 220.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 220.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 219.9
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 219.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 218.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 218.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 218.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 217.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 217.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 217.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 216.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 216.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 216.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 215.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 215.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 214.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 212.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 211.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 211.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 210.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 209.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 208.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 207.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 207.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 207.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 206.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 206.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 204.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 204.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 204.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 204.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 204.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 204.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 204.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 202.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 202.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 201.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 201.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 200.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 200.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 200.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 197.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 197.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 196.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 196.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 196.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 195.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 194.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 194.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 194.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 193.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 193.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 193.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 192.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 192.5
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 192.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 192.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 191.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 191.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 191.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 190.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 189.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 189.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 189.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 188.9
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 188.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 187.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 187.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 185.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 185.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 185.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 183.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 182.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 181.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 181.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 180.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 180.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 180.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 178.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 177.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 176.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 176.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 176.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 171.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 171.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 171.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 170.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 170.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 170.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 170.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 170.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 170.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 170.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 170.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 169.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 169.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 169.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 168.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 168.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 167.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 167.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 167.7
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 167.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 167.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 166.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 166.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 165.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 164.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 163.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 163.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 163.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 161.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 161.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 161.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 160.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 159.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 159.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 159.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 158.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 158.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 158.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 157.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 157.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 157.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 157.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 156.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 156.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 156.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 154.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 154.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 153.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 153.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 152.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 150.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 150.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 150.0
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 148.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 148.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 148.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 147.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 147.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 145.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 144.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 144.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 144.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 143.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 142.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 141.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 141.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 140.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 140.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 140.5
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 140.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 139.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 139.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 137.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 132.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 129.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 128.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 128.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 127.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 124.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 123.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 118.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 118.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 117.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 117.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 116.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 112.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 110.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 109.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 109.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 106.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 104.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 103.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 102.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 100.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 88.9
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 78.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 72.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 55.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

153.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 153.6
FF:10176-103C5 60 years, female 153.6

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.1
Macaque sample Sample description nTPM
Putamen
nTPM: 106.1
Samples: 2

Max nTPM: 106.1
Min nTPM: 106.0
Sample A 106.1
Sample B 106.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.9
Pig sample Sample description nTPM
Putamen
nTPM: 120.9
Samples: 3

Max nTPM: 129.4
Min nTPM: 104.6
Sample B Female 104.6
Sample C Male 128.8
Sample D Male 129.4

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