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BETA
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IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:0.5 nTPM
Monaco:170.0 nTPM
Schmiedel:177.6 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

0.5
HPA sample nTPM
Classical monocyte
nTPM: 0.5
Samples: 6

Max nTPM: 0.8
Min nTPM: 0.2
P10809_1003 0.5
P10809_1020 0.3
P10809_1039 0.2
P10809_1058 0.6
P10809_1080 0.8
P10809_1107 0.3
Intermediate monocyte
nTPM: 0.3
Samples: 6

Max nTPM: 1.3
Min nTPM: 0.0
P10809_1004 0.0
P10809_1023 0.0
P10809_1042 1.3
P10809_1061 0.0
P10809_1081 0.5
P10809_1108 0.0
Non-classical monocyte
nTPM: 0.1
Samples: 5

Max nTPM: 0.3
Min nTPM: 0.0
P10809_1005 0.3
P10809_1053 0.0
P10809_1072 0.0
P10809_1082 0.0
P10809_1109 0.1

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

170.0
Monaco sample nTPM
Classical monocyte
nTPM: 170.0
Samples: 4

Max nTPM: 452.6
Min nTPM: 66.4
RHH5313_R3680 66.4
RHH5221_R3593 452.6
RHH5250_R3622 87.2
RHH5279_R3651 73.7
Intermediate monocyte
nTPM: 33.9
Samples: 4

Max nTPM: 72.6
Min nTPM: 16.6
RHH5314_R3681 29.5
RHH5222_R3594 72.6
RHH5251_R3623 16.7
RHH5280_R3652 16.6
Non-classical monocyte
nTPM: 20.9
Samples: 4

Max nTPM: 32.7
Min nTPM: 12.5
RHH5315_R3682 12.5
RHH5223_R3595 32.7
RHH5252_R3624 22.3
RHH5281_R3653 15.9

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

177.6
Schmiedel sample id TPM
Classical monocyte
TPM: 177.6
Samples: 91

Max TPM: 450.8
Min TPM: 65.7
MONOCYTES_1 450.8
MONOCYTES_2 390.8
MONOCYTES_3 329.6
MONOCYTES_4 316.8
MONOCYTES_5 315.7
MONOCYTES_6 310.1
MONOCYTES_7 303.9
MONOCYTES_8 301.1
MONOCYTES_9 299.2
MONOCYTES_10 294.9
MONOCYTES_11 292.4
MONOCYTES_12 274.0
MONOCYTES_13 272.4
MONOCYTES_14 257.9
MONOCYTES_15 255.9
MONOCYTES_16 248.5
MONOCYTES_17 245.8
MONOCYTES_18 245.5
MONOCYTES_19 245.3
MONOCYTES_20 245.1
MONOCYTES_21 244.2
MONOCYTES_22 237.8
MONOCYTES_23 236.8
MONOCYTES_24 234.9
MONOCYTES_25 233.1
MONOCYTES_26 227.6
MONOCYTES_27 224.5
MONOCYTES_28 217.9
MONOCYTES_29 217.3
MONOCYTES_30 212.1
MONOCYTES_31 210.3
MONOCYTES_32 208.9
MONOCYTES_33 204.1
MONOCYTES_34 198.8
MONOCYTES_35 189.5
MONOCYTES_36 188.3
MONOCYTES_37 186.2
MONOCYTES_38 185.7
MONOCYTES_39 184.1
MONOCYTES_40 183.5
MONOCYTES_41 181.9
MONOCYTES_42 180.3
MONOCYTES_43 176.9
MONOCYTES_44 163.8
MONOCYTES_45 163.1
MONOCYTES_46 162.0
MONOCYTES_47 160.8
MONOCYTES_48 157.1
MONOCYTES_49 155.9
MONOCYTES_50 155.3
MONOCYTES_51 154.9
MONOCYTES_52 154.0
MONOCYTES_53 149.2
MONOCYTES_54 147.7
MONOCYTES_55 145.1
MONOCYTES_56 139.0
MONOCYTES_57 138.9
MONOCYTES_58 136.7
MONOCYTES_59 136.4
MONOCYTES_60 132.4
MONOCYTES_61 128.5
MONOCYTES_62 125.0
MONOCYTES_63 122.8
MONOCYTES_64 119.8
MONOCYTES_65 114.1
MONOCYTES_66 113.9
MONOCYTES_67 113.0
MONOCYTES_68 108.7
MONOCYTES_69 108.2
MONOCYTES_70 107.9
MONOCYTES_71 102.0
MONOCYTES_72 97.8
MONOCYTES_73 96.7
MONOCYTES_74 96.2
MONOCYTES_75 95.2
MONOCYTES_76 93.9
MONOCYTES_77 93.7
MONOCYTES_78 93.0
MONOCYTES_79 93.0
MONOCYTES_80 90.7
MONOCYTES_81 85.3
MONOCYTES_82 82.9
MONOCYTES_83 80.2
MONOCYTES_84 80.0
MONOCYTES_85 78.6
MONOCYTES_86 75.5
MONOCYTES_87 75.0
MONOCYTES_88 74.0
MONOCYTES_89 72.3
MONOCYTES_90 66.5
MONOCYTES_91 65.7
Show allShow less
Non-classical monocyte
TPM: 1.4
Samples: 90

Max TPM: 8.9
Min TPM: 0.1
M2_1 8.9
M2_2 8.1
M2_3 7.6
M2_4 7.1
M2_5 6.1
M2_6 4.2
M2_7 3.7
M2_8 3.4
M2_9 3.1
M2_10 2.8
M2_11 2.6
M2_12 2.3
M2_13 2.2
M2_14 2.1
M2_15 1.8
M2_16 1.8
M2_17 1.8
M2_18 1.7
M2_19 1.7
M2_20 1.7
M2_21 1.6
M2_22 1.6
M2_23 1.5
M2_24 1.5
M2_25 1.5
M2_26 1.5
M2_27 1.4
M2_28 1.4
M2_29 1.4
M2_30 1.3
M2_31 1.3
M2_32 1.3
M2_33 1.3
M2_34 1.2
M2_35 1.2
M2_36 1.2
M2_37 1.2
M2_38 1.1
M2_39 1.1
M2_40 1.1
M2_41 1.0
M2_42 1.0
M2_43 1.0
M2_44 1.0
M2_45 0.9
M2_46 0.9
M2_47 0.9
M2_48 0.9
M2_49 0.9
M2_50 0.9
M2_51 0.8
M2_52 0.8
M2_53 0.7
M2_54 0.7
M2_55 0.7
M2_56 0.7
M2_57 0.6
M2_58 0.6
M2_59 0.6
M2_60 0.6
M2_61 0.5
M2_62 0.5
M2_63 0.5
M2_64 0.4
M2_65 0.4
M2_66 0.4
M2_67 0.4
M2_68 0.4
M2_69 0.3
M2_70 0.3
M2_71 0.3
M2_72 0.3
M2_73 0.3
M2_74 0.3
M2_75 0.3
M2_76 0.2
M2_77 0.2
M2_78 0.2
M2_79 0.2
M2_80 0.2
M2_81 0.2
M2_82 0.2
M2_83 0.2
M2_84 0.2
M2_85 0.2
M2_86 0.2
M2_87 0.2
M2_88 0.1
M2_89 0.1
M2_90 0.1
Show allShow less

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