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  • KIAA0930
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:117.6 nTPM
HPA Brain:126.9 nTPM
GTEx:117.6 nTPM
FANTOM5:76.5 Scaled Tags Per Million
Pig:22.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 93.9
2565 Male, age 75, midline 107.1
2194 Female, age 79, both hemispheres 100.7
1981 Female, age 72, midline 93.5
2816 Male, age 47, midline 85.2
2048 Male, age 55, midline 83.0
Cervical spinal cord, dorsal horn
nTPM: 105.1
2173 Female, age 72, unknown 119.3
2297 Male, age 75, both hemispheres 114.4
2069 Male, age 47, both hemispheres 108.7
1877 Male, age 55, unknown 107.9
2721 Male, age 90, both hemispheres 104.3
2296 Male, age 66, both hemispheres 75.9
Cervical spinal cord, ventral horn
nTPM: 126.9
2480 Male, age 75, both hemispheres 149.1
2809 Male, age 90, both hemispheres 149.1
2295 Male, age 66, both hemispheres 136.8
2820 Female, age 79, both hemispheres 131.6
2068 Male, age 55, unknown 113.0
2098 Female, age 72, unknown 81.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 117.6
Samples: 204

Max nTPM: 297.7
Min nTPM: 45.4
Std nTPM: 41.1
Median nTPM: 111.3
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 297.7
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 282.7
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 279.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 243.4
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 219.9
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 212.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 199.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 194.8
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 192.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 192.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 191.5
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 189.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 188.4
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 188.4
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 188.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 183.8
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 183.7
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 179.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 174.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 172.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 165.6
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 163.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 163.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 161.3
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 160.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 160.2
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 159.1
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 158.7
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 157.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 155.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 155.9
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 155.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 154.4
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 154.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 153.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 153.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 152.3
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 148.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 147.6
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 146.3
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 144.8
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 143.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 143.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 142.6
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 142.4
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 141.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 141.3
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 139.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 137.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 136.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 135.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 135.6
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 134.5
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 134.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 132.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 132.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 130.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 130.8
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 130.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 129.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 129.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 129.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 129.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 128.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 128.1
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 127.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 126.7
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 126.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 126.5
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 126.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 126.5
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 125.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 125.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 125.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 124.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 124.8
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 124.3
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 123.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 122.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 122.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 121.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 121.1
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 120.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 119.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 119.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 119.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 119.0
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 118.1
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 117.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 117.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 116.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 116.8
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 116.8
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 115.5
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 115.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 114.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 113.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 112.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 111.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 111.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 111.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 111.4
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 111.1
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 111.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 109.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 109.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 107.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 107.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 106.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 105.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 104.9
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 104.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 104.3
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 104.0
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 103.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 102.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 102.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 102.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 101.8
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 101.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 101.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 100.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 100.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 100.3
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 100.0
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 99.6
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 98.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 97.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 96.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 96.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 96.5
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 96.2
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 96.0
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 95.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 95.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 94.8
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 94.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 94.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 94.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 93.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 93.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 92.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 92.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 92.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 92.0
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 91.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 91.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 91.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 90.9
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 90.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 89.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 89.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 89.4
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 88.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 88.4
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 87.2
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 87.1
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 85.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 85.1
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 84.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 84.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 83.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 83.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 83.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 82.3
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 82.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 81.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 81.2
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 79.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 79.7
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 79.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 79.1
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 78.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 78.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 78.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 78.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 77.9
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 77.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 77.6
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 77.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 77.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 77.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 77.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 77.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 75.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 74.6
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 74.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 74.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 72.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 72.2
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 70.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 69.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 68.6
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 68.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 67.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 67.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 66.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 66.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 64.5
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 64.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 59.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 59.0
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 54.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 45.4
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

76.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 76.5
FF:10181-103D1 60 years, female 76.6
FF:10159-103A6 76 years, female 76.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 19.8
Samples: 4

Max nTPM: 24.8
Min nTPM: 16.4
Sample A Female 21.1
Sample B Female 16.8
Sample C Male 16.4
Sample D Male 24.8
Ventral spinal cord
nTPM: 22.5
Samples: 4

Max nTPM: 24.4
Min nTPM: 20.6
Sample A Female 21.1
Sample B Female 20.6
Sample C Male 24.4
Sample D Male 23.8

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