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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • KCTD17
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:186.1 nTPM
GTEx:147.4 nTPM
FANTOM5:82.5 Scaled Tags Per Million
Macaque:133.5 nTPM
Pig:173.0 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.1
Sample id Sample description nTPM
Putamen
nTPM: 186.1
2466 Female, age 79, unknown 277.5
2489 Female, age 72, unknown 272.3
1829 Male, age 74, unknown 221.4
2647 Male, age 75, left hemisphere 158.7
1838 Male, age 80, right hemisphere 151.5
1937 Female, age 91, right hemisphere 122.0
2482 Female, age 94, left hemisphere 99.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

147.4
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 147.4
Samples: 254

Max nTPM: 446.0
Min nTPM: 33.7
Std nTPM: 63.1
Median nTPM: 145.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 446.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 305.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 295.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 282.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 275.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 273.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 270.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 268.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 268.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 267.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 263.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 258.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 248.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 246.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 240.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 238.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 237.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 235.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 234.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 231.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 230.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 228.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 227.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 227.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 226.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 225.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 225.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 225.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 223.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 223.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 223.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 220.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 218.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 218.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 216.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 216.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 213.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 212.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 211.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 209.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 208.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 207.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 205.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 205.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 205.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 203.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 203.5
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 203.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 202.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 202.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 202.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 200.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 199.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 198.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 197.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 195.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 195.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 195.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 195.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 194.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 193.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 192.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 191.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 190.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 190.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 189.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 188.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 188.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 187.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 187.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 187.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 186.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 182.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 182.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 181.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 181.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 180.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 180.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 178.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 178.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 178.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 177.8
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 177.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 176.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 175.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 174.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 174.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 174.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 174.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 174.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 174.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 173.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 172.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 172.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 172.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 170.6
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 170.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 170.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 170.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 168.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 167.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 166.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 164.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 164.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 163.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 162.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 161.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 159.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 159.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 158.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 156.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 155.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 155.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 155.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 153.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 153.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 153.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 151.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 150.7
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 150.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 148.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 148.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 148.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 147.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 147.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 146.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 145.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 145.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 145.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 144.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 144.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 144.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 141.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 140.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 140.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 139.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 139.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 139.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 138.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 137.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 137.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 136.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 135.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 135.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 134.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 134.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 134.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 133.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 132.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 132.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 132.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 131.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 127.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 126.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 125.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 124.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 124.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 124.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 122.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 122.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 122.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 121.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 120.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 119.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 119.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 119.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 119.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 116.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 116.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 116.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 115.9
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 115.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 113.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 112.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 110.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 109.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 108.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 108.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 107.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 106.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 105.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 105.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 103.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 102.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 102.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 101.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 101.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 101.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 100.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 99.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 98.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 98.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 97.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 96.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 95.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 92.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 91.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 89.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 89.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 88.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 88.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 86.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 85.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 85.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 85.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 85.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 84.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 84.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 82.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 82.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 81.5
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 81.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 80.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 79.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 79.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 79.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 78.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 77.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 76.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 72.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 71.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 71.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 68.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 67.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 65.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 64.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 64.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 63.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 63.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 62.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 61.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 61.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 61.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 60.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 59.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 58.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 57.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 57.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 55.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 53.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 53.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 51.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 50.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 48.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 46.8
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 46.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 45.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 44.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 42.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 39.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 38.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 36.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 33.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 33.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

82.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 82.5
FF:10176-103C5 60 years, female 82.5

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

133.5
Macaque sample Sample description nTPM
Putamen
nTPM: 133.5
Samples: 2

Max nTPM: 153.2
Min nTPM: 113.8
Sample A 113.8
Sample B 153.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.0
Pig sample Sample description nTPM
Putamen
nTPM: 173.0
Samples: 3

Max nTPM: 238.9
Min nTPM: 138.1
Sample B Female 138.1
Sample C Male 238.9
Sample D Male 142.0

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