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  • TISSUE

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  • EIF5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:57.3 nTPM
HPA Brain:105.8 nTPM
GTEx:57.3 nTPM
Pig:66.6 nTPM
Mouse:196.8 nTPM
Allen mouse:0.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 91.2
2226 Male, age 75, left hemisphere 100.6
1961 Female, age 42, unknown 81.9
Dorsomedial nucleus
nTPM: 81.8
2041 Female, age 72, unknown 90.8
1989 Male, age 62, unknown 77.7
2017 Female, age 42, unknown 77.0
Lateral hypothalamic area
nTPM: 105.8
1791 Male, age 80, right hemisphere 142.7
2228 Male, age 66, unknown 110.6
2271 Male, age 75, both hemispheres 91.7
2412 Male, age 62, unknown 78.2
Mammillary body
nTPM: 104.5
1923 Female, age 72, unknown 141.6
1948 Female, age 72, unknown 108.8
1945 Male, age 80, right hemisphere 92.1
2413 Male, age 66, unknown 91.1
1834 Female, age 42, unknown 88.5
Paraventricular nucleus
nTPM: 78.1
2700 Male, age 62, unknown 78.1
Preoptic area
nTPM: 95.6
1907 Male, age 80, right hemisphere 117.3
1861 Female, age 42, unknown 85.6
2414 Female, age 72, unknown 84.0
Supraoptic nucleus
nTPM: 102.6
1894 Female, age 72, unknown 125.4
2043 Male, age 62, unknown 104.3
2835 Female, age 72, unknown 78.1
Ventromedial nucleus
nTPM: 91.7
1982 Female, age 72, unknown 100.5
1822 Female, age 42, unknown 82.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 57.3
Samples: 257

Max nTPM: 124.5
Min nTPM: 33.3
Std nTPM: 12.8
Median nTPM: 55.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 124.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 105.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 93.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 93.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 92.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 92.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 89.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 87.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 82.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 81.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 81.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 81.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 80.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 80.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 80.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 79.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 79.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 79.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 78.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 77.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 76.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 75.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 75.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 74.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 73.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 73.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 73.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 72.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 72.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 72.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 71.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 71.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 71.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 71.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 71.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 70.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 70.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 70.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 69.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 68.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 67.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 67.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 67.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 67.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 66.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 66.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 66.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 66.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 66.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 66.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 65.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 65.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 65.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 65.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 65.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 64.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 64.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 64.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 64.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 64.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 64.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 64.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 64.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 63.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 63.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 63.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 63.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 63.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 63.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 63.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 63.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 63.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 63.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 63.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 62.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 62.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 62.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 61.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 61.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 61.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 61.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 61.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 61.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 61.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 61.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 60.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 60.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 60.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 60.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 60.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 59.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 59.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 59.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 59.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 59.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 59.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 59.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 59.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 59.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 58.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 58.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 58.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 58.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 58.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 58.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 58.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 58.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 57.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 57.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 57.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 57.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 57.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 57.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 57.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 57.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 57.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 56.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 56.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 56.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 56.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 56.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 56.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 56.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 56.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 56.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 56.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 56.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 55.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 55.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 55.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 55.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 55.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 54.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 54.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 54.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 54.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 54.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 54.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 54.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 54.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 54.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 53.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 53.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 53.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 53.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 53.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 53.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 53.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 53.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 52.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 52.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 52.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 52.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 52.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 52.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 52.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 52.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 52.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 51.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 51.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 51.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 51.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 51.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 51.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 50.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 50.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 50.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 50.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 50.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 50.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 50.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 50.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 50.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 50.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 50.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 50.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 50.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 50.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 50.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 50.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 49.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 49.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 49.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 49.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 49.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 49.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 48.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 48.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 48.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 48.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 48.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 48.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 48.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 47.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 47.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 47.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 47.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 47.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 47.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 47.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 47.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 47.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 46.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 46.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 46.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 46.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 46.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 46.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 46.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 46.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 46.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 46.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 46.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 46.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 46.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 45.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 45.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 45.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 45.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 45.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 45.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 45.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 45.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 44.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 44.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 44.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 44.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 43.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 43.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 43.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 43.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 43.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 43.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 43.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 43.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 42.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 42.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 42.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 41.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 41.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 41.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 41.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 40.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 39.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 39.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 39.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 38.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 38.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 38.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 38.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 37.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 37.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 37.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 36.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 35.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 33.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 33.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 66.6
Samples: 4

Max nTPM: 87.3
Min nTPM: 50.4
Sample A Female 87.3
Sample B Female 69.9
Sample C Male 58.9
Sample D Male 50.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

196.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 196.8
Samples: 4

Max nTPM: 217.6
Min nTPM: 179.6
Sample A Male 187.2
Sample B Male 202.6
Sample C Female 217.6
Sample D Female 179.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.9
1704 Antisense, RP_040604_01_G12, Mouse strain C57BL/6J (56 days, male) 0.9

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