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  • TISSUE

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  • PSMA6
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:85.3 nTPM
HPA Brain:69.3 nTPM
GTEx:85.3 nTPM
Pig:68.3 nTPM
Mouse:225.9 nTPM
Allen mouse:7.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 67.8
2226 Male, age 75, left hemisphere 79.0
1961 Female, age 42, unknown 56.6
Dorsomedial nucleus
nTPM: 52.3
2041 Female, age 72, unknown 65.0
1989 Male, age 62, unknown 49.1
2017 Female, age 42, unknown 43.0
Lateral hypothalamic area
nTPM: 64.7
1791 Male, age 80, right hemisphere 76.7
2271 Male, age 75, both hemispheres 69.6
2228 Male, age 66, unknown 58.8
2412 Male, age 62, unknown 53.7
Mammillary body
nTPM: 56.3
1923 Female, age 72, unknown 66.8
2413 Male, age 66, unknown 65.6
1945 Male, age 80, right hemisphere 52.1
1948 Female, age 72, unknown 50.0
1834 Female, age 42, unknown 47.2
Paraventricular nucleus
nTPM: 49.1
2700 Male, age 62, unknown 49.1
Preoptic area
nTPM: 53.4
1907 Male, age 80, right hemisphere 65.2
1861 Female, age 42, unknown 51.0
2414 Female, age 72, unknown 44.0
Supraoptic nucleus
nTPM: 69.3
1894 Female, age 72, unknown 73.4
2835 Female, age 72, unknown 70.0
2043 Male, age 62, unknown 64.7
Ventromedial nucleus
nTPM: 61.6
1982 Female, age 72, unknown 64.9
1822 Female, age 42, unknown 58.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 85.3
Samples: 257

Max nTPM: 173.8
Min nTPM: 46.8
Std nTPM: 18.4
Median nTPM: 82.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 173.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 173.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 163.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 140.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 140.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 137.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 132.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 124.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 122.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 120.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 119.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 119.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 119.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 118.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 114.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 113.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 113.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 113.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 112.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 112.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 111.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 107.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 107.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 106.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 104.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 104.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 104.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 104.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 103.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 103.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 102.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 101.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 101.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 101.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 101.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 100.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 100.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 100.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 99.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 99.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 99.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 99.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 98.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 98.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 97.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 97.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 97.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 97.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 97.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 97.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 97.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 96.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 96.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 96.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 96.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 95.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 95.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 95.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 95.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 95.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 94.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 94.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 94.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 94.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 94.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 94.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 94.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 93.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 93.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 93.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 92.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 92.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 92.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 92.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 92.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 92.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 92.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 92.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 91.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 91.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 91.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 91.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 91.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 91.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 90.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 90.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 89.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 89.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 89.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 89.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 89.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 88.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 88.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 88.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 88.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 87.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 87.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 87.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 87.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 86.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 86.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 86.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 86.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 86.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 86.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 85.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 85.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 85.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 85.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 85.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 84.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 84.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 84.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 84.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 84.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 84.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 83.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 83.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 83.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 83.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 83.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 83.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 83.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 82.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 82.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 82.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 82.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 82.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 82.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 82.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 81.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 81.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 81.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 81.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 80.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 80.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 80.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 80.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 80.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 80.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 80.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 80.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 80.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 79.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 79.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 79.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 79.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 79.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 79.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 79.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 79.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 79.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 79.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 79.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 79.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 79.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 78.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 78.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 78.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 78.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 78.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 77.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 77.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 77.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 77.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 77.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 77.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 77.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 77.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 77.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 76.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 76.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 76.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 76.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 76.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 76.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 76.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 76.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 76.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 76.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 75.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 75.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 75.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 75.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 74.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 74.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 74.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 74.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 74.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 74.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 74.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 74.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 73.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 73.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 73.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 73.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 73.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 73.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 72.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 72.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 72.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 72.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 72.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 71.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 71.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 71.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 71.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 71.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 71.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 71.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 70.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 70.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 70.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 70.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 70.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 70.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 69.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 69.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 69.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 69.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 69.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 69.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 68.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 68.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 68.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 68.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 68.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 68.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 67.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 67.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 66.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 66.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 66.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 66.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 65.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 65.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 65.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 65.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 64.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 64.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 63.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 61.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 61.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 59.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 59.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 59.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 59.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 59.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 58.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 57.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 56.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 55.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 54.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 49.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 48.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 48.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 46.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 68.3
Samples: 4

Max nTPM: 88.8
Min nTPM: 54.3
Sample A Female 88.8
Sample B Female 69.9
Sample C Male 60.0
Sample D Male 54.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

225.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 225.9
Samples: 4

Max nTPM: 240.1
Min nTPM: 209.2
Sample A Male 209.2
Sample B Male 240.1
Sample C Female 233.9
Sample D Female 220.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 7.3
69817408 Antisense, RP_050510_03_C12, Mouse strain C57BL/6J (56 days, male) 7.3

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