HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		126.926
RNA expressioni
Consensus:14.0 nTPM
HPA Brain:96.6 nTPM
GTEx:14.0 nTPM
FANTOM5:16.5 Scaled Tags Per Million
Pig:83.9 nTPM
Mouse:14.5 nTPM
Allen mouse:2.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053342
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079777
Hippocampal formation mean intensity 126.926
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 106.560
Molecular layer of the dentate gyrus 20.908
Granular dentate gyrus 28.255
CA1 - oriens layer 18.860
CA1 - pyramidal layer 35.668
CA1 - radiatum layer 26.153
CA2 - oriens layer 28.906
CA2 - pyramidal layer 50.556
CA2 - radiatum layer 28.684
CA3 - oriens layer 25.262
CA3 - pyramidal layer 50.235
CA3 - radiatum layer 26.187
Stratum lucidum 126.926
Lacunosum moleculare 23.708
Subiculum 3.388

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 96.6
Sample id Sample description nTPM
Hippocampus
nTPM: 44.2
1855 Male, age 76, left hemisphere 113.2
2148 Female, age 91, left hemisphere 64.5
2621 Female, age 67, right hemisphere 29.6
1898 Male, age 80, left hemisphere 25.7
1911 Female, age 85, right hemisphere 18.6
2529 Female, age 94, left hemisphere 13.3
Dentate gyrus
nTPM: 53.4
2010 Male, age 76, both hemispheres 113.8
2531 Female, age 67, both hemispheres 79.5
1927 Female, age 91, both hemispheres 61.1
2528 Male, age 74, both hemispheres 26.7
2246 Female, age 85, both hemispheres 22.9
2530 Female, age 94, left hemisphere 16.5
Entorhinal gyrus
nTPM: 20.9
1938 Female, age 85, left hemisphere 39.4
2764 Male, age 80, right hemisphere 21.8
1787 Male, age 76, left hemisphere 19.4
2117 Female, age 91, right hemisphere 17.2
2613 Female, age 94, left hemisphere 17.2
2686 Male, age 75, right hemisphere 10.3
Hippocampus, CA1
nTPM: 96.6
2045 Male, age 76, both hemispheres 408.2
1873 Female, age 85, both hemispheres 31.9
2749 Male, age 80, left hemisphere 24.0
2527 Male, age 74, both hemispheres 14.8
2082 Female, age 91, right hemisphere 4.0
Hippocampus, CA2
nTPM: 23.1
1892 Male, age 76, both hemispheres 63.1
1940 Female, age 85, left hemisphere 38.4
1963 Male, age 80, left hemisphere 17.6
2113 Female, age 91, right hemisphere 8.3
2437 Female, age 94, left hemisphere 6.2
2249 Male, age 74, both hemispheres 5.0
Hippocampus, CA3
nTPM: 63.3
1867 Male, age 76, both hemispheres 136.4
2620 Female, age 94, left hemisphere 122.7
2861 Female, age 67, both hemispheres 66.0
1891 Female, age 85, both hemispheres 26.4
2436 Male, age 74, both hemispheres 14.2
2137 Male, age 80, left hemisphere 14.1
Parahippocampal cortex
nTPM: 25.3
1933 Female, age 85, both hemispheres 60.8
2018 Male, age 76, both hemispheres 60.0
2693 Female, age 94, both hemispheres 34.1
2245 Female, age 91, both hemispheres 27.3
2532 Female, age 72, left hemisphere 17.2
1850 Male, age 80, both hemispheres 16.3
1990 Female, age 91, right hemisphere 15.6
2622 Female, age 67, right hemisphere 8.4
2250 Female, age 67, right hemisphere 7.0
2692 Male, age 74, both hemispheres 6.2
Perirhinal gyrus
nTPM: 35.1
2521 Female, age 94, right hemisphere 70.6
2848 Male, age 76, right hemisphere 43.5
1847 Female, age 91, left hemisphere 42.1
1794 Male, age 80, right hemisphere 11.2
1841 Female, age 85, right hemisphere 8.2
Subiculum
nTPM: 22.3
1977 Female, age 85, both hemispheres 52.6
2729 Female, age 91, right hemisphere 42.0
2042 Male, age 76, both hemispheres 16.3
2619 Male, age 74, both hemispheres 13.3
1901 Male, age 80, both hemispheres 7.8
2438 Female, age 94, left hemisphere 1.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.0
Samples: 255

Max nTPM: 103.5
Min nTPM: 0.0
Std nTPM: 19.9
Median nTPM: 5.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 103.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 97.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 93.6
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 89.6
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 86.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 86.4
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 78.2
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 73.8
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 68.0
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 63.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 62.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 16.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.5
FF:10169-103B7 60 years, female 20.7
FF:10153-102I9 76 years, female 12.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 83.9
Pig sample Sample description nTPM
Subiculum
nTPM: 26.6
Samples: 4

Max nTPM: 32.2
Min nTPM: 18.0
Sample A Female 18.0
Sample B Female 26.5
Sample C Male 32.2
Sample D Male 29.5
Dorsal hippocampus
nTPM: 83.9
Samples: 4

Max nTPM: 116.7
Min nTPM: 34.4
Sample A Female 90.9
Sample B Female 116.7
Sample C Male 34.4
Sample D Male 93.4
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 14.3
Min nTPM: 2.8
Sample A Female 4.6
Sample B Female 2.8
Sample C Male 14.3
Sample D Male 3.8
Ventral hippocampus
nTPM: 65.6
Samples: 4

Max nTPM: 161.0
Min nTPM: 27.0
Sample A Female 29.6
Sample B Female 27.0
Sample C Male 44.6
Sample D Male 161.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 17.9
Min nTPM: 11.7
Sample A Male 15.8
Sample B Male 17.9
Sample C Female 11.7
Sample D Female 12.5
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 12.6
Min nTPM: 10.4
Sample A Male 11.6
Sample B Male 12.6
Sample C Female 12.4
Sample D Female 10.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
71717084 Antisense, RP_050505_04_B03, Mouse strain C57BL/6J (56 days, male) 2.3
69782969 Antisense, RP_050505_04_B03, Mouse strain C57BL/6J (56 days, male) 1.9

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