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  • SUMMARY

  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

91.953
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:14.8 nTPM
HPA Brain:40.4 nTPM
GTEx:14.8 nTPM
Pig:50.0 nTPM
Mouse:60.7 nTPM
Allen mouse:4.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB079777
Hypothalamus mean intensity 91.953
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 5.946
Periventricular hypothalamic nucleus 91.404
Supraoptic nucleus 79.780
Tuberal nucleus 19.945
Ventral tuberomammillary nucleus 37.739
Lateral preoptic area 82.835
Medial preoptic area 67.380
Suprachiasmatic nucleus 13.543
Paraventricular hypothalamic nucleus 59.611
Anterior hypothalamic area, central 45.628
Ventral medial hypothalamic nucleus 39.103
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 63.792
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 91.953
Dorsal medial hypothalamic nucleus 37.646
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 31.4
1961 Female, age 42, unknown 57.9
2226 Male, age 75, left hemisphere 4.9
Dorsomedial nucleus
nTPM: 40.4
2041 Female, age 72, unknown 66.6
2017 Female, age 42, unknown 50.7
1989 Male, age 62, unknown 3.8
Lateral hypothalamic area
nTPM: 11.6
2228 Male, age 66, unknown 18.4
1791 Male, age 80, right hemisphere 11.7
2412 Male, age 62, unknown 11.1
2271 Male, age 75, both hemispheres 5.3
Mammillary body
nTPM: 2.8
1945 Male, age 80, right hemisphere 7.5
1948 Female, age 72, unknown 3.0
2413 Male, age 66, unknown 1.4
1834 Female, age 42, unknown 1.2
1923 Female, age 72, unknown 1.1
Paraventricular nucleus
nTPM: 33.7
2700 Male, age 62, unknown 33.7
Preoptic area
nTPM: 11.8
2414 Female, age 72, unknown 24.2
1861 Female, age 42, unknown 7.8
1907 Male, age 80, right hemisphere 3.4
Supraoptic nucleus
nTPM: 15.7
2043 Male, age 62, unknown 19.2
2835 Female, age 72, unknown 15.2
1894 Female, age 72, unknown 12.7
Ventromedial nucleus
nTPM: 23.2
1822 Female, age 42, unknown 32.3
1982 Female, age 72, unknown 14.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 14.8
Samples: 257

Max nTPM: 422.5
Min nTPM: 0.0
Std nTPM: 32.2
Median nTPM: 6.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 422.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 148.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 128.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 111.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 92.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 84.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 77.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 72.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 71.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 66.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 64.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 61.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 60.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 50.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 48.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 43.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 39.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 39.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 39.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 37.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 34.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 33.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 33.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 32.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 32.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 31.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 31.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 30.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 30.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 30.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 29.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 28.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 28.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 26.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 26.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 25.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 24.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 23.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 22.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 21.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 21.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 20.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 20.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 20.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 20.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 20.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 20.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 19.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 19.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 19.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 19.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 19.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 18.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 18.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 18.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 18.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 17.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 17.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 17.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 17.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 17.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 17.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 17.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 16.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 16.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 15.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 15.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 15.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 15.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 15.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 14.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 14.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 14.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 14.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 13.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 13.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 13.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 13.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 12.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 12.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 12.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 12.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 11.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 11.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 11.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 11.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 11.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 10.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 10.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 10.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 10.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 10.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 10.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 10.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 10.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 9.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 9.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 9.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 9.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 9.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 8.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 8.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 8.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 8.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 8.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 8.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 8.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 8.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 8.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 8.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 8.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 8.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 8.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 8.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 7.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 7.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 7.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 7.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 7.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 7.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 7.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 7.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 7.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 7.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 6.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 6.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 6.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 6.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 6.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 6.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 6.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 6.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 6.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 5.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 5.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 5.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 5.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 5.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 5.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 5.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 5.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 5.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 5.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 5.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 5.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 5.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 4.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 4.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 4.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 4.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 4.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 4.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 4.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 4.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 4.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 4.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 4.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 4.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 4.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 4.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 4.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 4.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 4.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 4.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 4.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 4.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 4.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 3.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 3.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 3.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 3.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 3.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 3.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 3.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 3.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 3.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 3.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 3.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 3.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 3.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 3.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 3.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 3.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 3.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 3.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 3.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 3.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 3.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 3.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 3.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 2.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 2.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 2.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 2.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 2.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 2.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 2.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 2.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 2.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 2.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 2.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 2.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 2.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 2.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 2.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 2.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 1.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 1.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 1.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 1.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 1.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 1.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 1.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 1.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 0.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 0.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 0.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 0.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 0.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 0.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 0.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 0.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 0.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 0.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 0.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 0.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 0.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 0.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 0.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 0.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 0.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 0.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 0.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 0.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 0.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 0.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 0.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 0.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 0.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 0.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 0.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 50.0
Samples: 4

Max nTPM: 96.8
Min nTPM: 21.3
Sample A Female 96.8
Sample B Female 51.4
Sample C Male 21.3
Sample D Male 30.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 60.8
Samples: 4

Max nTPM: 70.1
Min nTPM: 52.6
Sample A Male 70.1
Sample B Male 65.8
Sample C Female 54.5
Sample D Female 52.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.2
71717084 Antisense, RP_050505_04_B03, Mouse strain C57BL/6J (56 days, male) 4.2
69782969 Antisense, RP_050505_04_B03, Mouse strain C57BL/6J (56 days, male) 3.3

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