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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • CST3
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:2188.3 nTPM
GTEx:4698.8 nTPM
FANTOM5:2269.7 Scaled Tags Per Million
Macaque:172.6 nTPM
Pig:1225.6 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2188.3
Sample id Sample description nTPM
Putamen
nTPM: 2188.3
2489 Female, age 72, unknown 2811.7
2482 Female, age 94, left hemisphere 2758.1
2647 Male, age 75, left hemisphere 2559.7
2466 Female, age 79, unknown 2154.5
1829 Male, age 74, unknown 1776.0
1937 Female, age 91, right hemisphere 1659.7
1838 Male, age 80, right hemisphere 1598.4

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4698.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 4698.8
Samples: 254

Max nTPM: 15650.4
Min nTPM: 582.4
Std nTPM: 2685.2
Median nTPM: 4027.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 15650.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 14696.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 13853.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 12095.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 12042.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 11999.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 11976.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 11868.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11233.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 10946.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 10690.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 10274.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 10235.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 10130.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 9822.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 9682.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 9638.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 9204.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 9158.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 8914.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 8751.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 8507.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 8489.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 8458.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 8409.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 8395.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 8382.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 7976.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 7867.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 7858.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 7758.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 7714.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 7604.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 7579.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 7488.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 7441.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 7301.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 7249.7
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 7227.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 7205.0
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 7140.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 7125.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 7114.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 7075.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 6987.2
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 6938.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 6937.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 6864.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 6838.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 6716.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 6689.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 6674.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 6613.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 6497.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 6468.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 6452.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 6314.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 6285.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 6207.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 6205.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 6104.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 6063.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 5992.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 5952.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 5941.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 5888.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 5864.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 5848.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 5839.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 5797.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 5750.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 5719.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 5706.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 5641.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 5607.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 5517.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 5492.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 5439.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 5422.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 5406.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 5391.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 5375.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 5318.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 5314.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 5310.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 5291.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 5258.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 5238.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 5237.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 5135.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 5087.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 5081.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 5049.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 5015.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 4988.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 4981.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 4941.3
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 4899.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 4852.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 4815.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 4809.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 4793.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 4774.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 4714.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 4707.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 4700.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 4699.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 4698.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 4697.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 4648.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 4510.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 4497.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 4493.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 4481.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 4445.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 4433.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 4391.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 4340.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 4320.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 4307.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 4274.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 4246.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 4235.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 4201.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 4182.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 4107.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 4028.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 4025.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 4006.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 3854.0
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 3837.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 3837.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 3836.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 3815.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 3784.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 3757.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 3749.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 3723.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 3679.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 3677.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 3662.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 3656.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 3647.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 3624.1
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 3621.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 3615.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 3559.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 3553.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 3552.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 3530.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 3518.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 3511.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 3460.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 3457.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 3445.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 3414.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 3407.3
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 3341.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 3336.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 3335.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 3307.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 3289.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 3288.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 3274.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 3242.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 3211.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 3173.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 3171.4
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 3122.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 3116.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 3091.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 3079.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 3049.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 3040.1
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 2996.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 2968.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 2961.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 2946.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 2929.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 2914.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 2882.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 2878.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 2866.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 2863.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 2838.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 2821.5
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 2819.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 2801.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 2798.2
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 2764.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 2738.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 2702.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 2699.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 2682.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 2633.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 2613.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 2585.7
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 2530.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 2479.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 2450.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 2433.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 2425.6
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 2414.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 2371.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 2358.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 2347.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 2343.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 2336.0
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 2312.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 2289.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 2277.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 2274.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 2235.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 2230.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 2209.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 2170.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 2168.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 2127.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 2112.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 2108.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 2089.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 2067.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 2063.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2047.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 2044.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 2023.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1975.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 1946.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1907.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1900.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1886.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1869.4
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 1862.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 1857.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 1849.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 1832.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1804.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1744.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1720.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1704.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1691.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1641.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1622.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1559.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1518.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1490.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1470.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1468.7
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1449.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1393.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1296.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 962.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 894.1
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 582.4
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2269.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 2269.7
FF:10176-103C5 60 years, female 2269.7

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

172.6
Macaque sample Sample description nTPM
Putamen
nTPM: 172.7
Samples: 2

Max nTPM: 180.8
Min nTPM: 164.5
Sample A 164.5
Sample B 180.8

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1225.6
Pig sample Sample description nTPM
Putamen
nTPM: 1225.6
Samples: 3

Max nTPM: 1309.4
Min nTPM: 1183.3
Sample B Female 1184.0
Sample C Male 1309.4
Sample D Male 1183.3

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