HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:193.1 nTPM
HPA Brain:189.1 nTPM
GTEx:193.1 nTPM
FANTOM5:251.6 Scaled Tags Per Million
Pig:152.0 nTPM
Mouse:41.8 nTPM
Allen mouse:1.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007649Antibody HPA052474Antibody HPA052484Antibody CAB037174
Glial cells Not detectedNot detectedLowNot detected
Neuronal cells MediumHighHighHigh









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 189.1
Sample id Sample description nTPM
Hippocampus
nTPM: 163.1
1898 Male, age 80, left hemisphere 210.2
2621 Female, age 67, right hemisphere 191.5
1855 Male, age 76, left hemisphere 160.2
2148 Female, age 91, left hemisphere 142.2
2529 Female, age 94, left hemisphere 137.9
1911 Female, age 85, right hemisphere 136.5
Dentate gyrus
nTPM: 171.0
2530 Female, age 94, left hemisphere 227.1
1927 Female, age 91, both hemispheres 200.5
2010 Male, age 76, both hemispheres 183.7
2246 Female, age 85, both hemispheres 149.8
2531 Female, age 67, both hemispheres 140.4
2528 Male, age 74, both hemispheres 124.4
Entorhinal gyrus
nTPM: 189.1
2613 Female, age 94, left hemisphere 239.9
2764 Male, age 80, right hemisphere 231.2
1938 Female, age 85, left hemisphere 188.7
1787 Male, age 76, left hemisphere 185.1
2686 Male, age 75, right hemisphere 168.9
2117 Female, age 91, right hemisphere 120.9
Hippocampus, CA1
nTPM: 189.1
2749 Male, age 80, left hemisphere 355.8
1873 Female, age 85, both hemispheres 175.9
2527 Male, age 74, both hemispheres 142.8
2045 Male, age 76, both hemispheres 137.9
2082 Female, age 91, right hemisphere 133.1
Hippocampus, CA2
nTPM: 164.6
1892 Male, age 76, both hemispheres 228.3
1963 Male, age 80, left hemisphere 209.6
2437 Female, age 94, left hemisphere 182.8
2249 Male, age 74, both hemispheres 131.1
1940 Female, age 85, left hemisphere 120.2
2113 Female, age 91, right hemisphere 115.4
Hippocampus, CA3
nTPM: 181.1
2137 Male, age 80, left hemisphere 255.3
1867 Male, age 76, both hemispheres 203.4
2620 Female, age 94, left hemisphere 184.9
2861 Female, age 67, both hemispheres 177.6
1891 Female, age 85, both hemispheres 133.8
2436 Male, age 74, both hemispheres 131.4
Parahippocampal cortex
nTPM: 173.5
2245 Female, age 91, both hemispheres 209.2
1990 Female, age 91, right hemisphere 193.1
1850 Male, age 80, both hemispheres 190.3
2622 Female, age 67, right hemisphere 181.7
2532 Female, age 72, left hemisphere 173.3
1933 Female, age 85, both hemispheres 170.3
2250 Female, age 67, right hemisphere 168.4
2693 Female, age 94, both hemispheres 152.7
2018 Male, age 76, both hemispheres 150.9
2692 Male, age 74, both hemispheres 145.1
Perirhinal gyrus
nTPM: 186.8
1847 Female, age 91, left hemisphere 247.1
1794 Male, age 80, right hemisphere 202.9
2521 Female, age 94, right hemisphere 176.4
1841 Female, age 85, right hemisphere 161.1
2848 Male, age 76, right hemisphere 146.7
Subiculum
nTPM: 159.8
1901 Male, age 80, both hemispheres 199.8
1977 Female, age 85, both hemispheres 194.3
2042 Male, age 76, both hemispheres 162.4
2619 Male, age 74, both hemispheres 161.1
2438 Female, age 94, left hemisphere 142.3
2729 Female, age 91, right hemisphere 99.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 193.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 193.1
Samples: 255

Max nTPM: 450.5
Min nTPM: 36.7
Std nTPM: 71.9
Median nTPM: 182.6
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 450.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 407.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 387.2
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 378.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 375.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 371.3
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 356.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 356.2
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 352.1
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 351.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 344.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 251.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 251.6
FF:10169-103B7 60 years, female 303.2
FF:10153-102I9 76 years, female 200.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 152.0
Pig sample Sample description nTPM
Subiculum
nTPM: 146.2
Samples: 4

Max nTPM: 210.0
Min nTPM: 118.8
Sample A Female 210.0
Sample B Female 128.7
Sample C Male 127.3
Sample D Male 118.8
Dorsal hippocampus
nTPM: 152.0
Samples: 4

Max nTPM: 220.6
Min nTPM: 96.9
Sample A Female 220.6
Sample B Female 137.4
Sample C Male 153.2
Sample D Male 96.9
Entorhinal cortex
nTPM: 140.9
Samples: 4

Max nTPM: 157.7
Min nTPM: 121.0
Sample A Female 145.5
Sample B Female 139.5
Sample C Male 157.7
Sample D Male 121.0
Ventral hippocampus
nTPM: 132.4
Samples: 4

Max nTPM: 170.8
Min nTPM: 92.0
Sample A Female 137.0
Sample B Female 92.0
Sample C Male 170.8
Sample D Male 129.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 41.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.8
Samples: 4

Max nTPM: 48.4
Min nTPM: 38.0
Sample A Male 38.0
Sample B Male 42.3
Sample C Female 38.5
Sample D Female 48.4
Hippocampal formation
nTPM: 35.5
Samples: 4

Max nTPM: 41.7
Min nTPM: 31.3
Sample A Male 36.3
Sample B Male 32.7
Sample C Female 31.3
Sample D Female 41.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
69751973 Antisense, RP_050503_04_H01, Mouse strain C57BL/6J (56 days, male) 1.8

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