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NECAB2
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • NECAB2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

165.156
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:77.4 nTPM
HPA Brain:98.0 nTPM
GTEx:77.4 nTPM
Mouse:37.4 nTPM
Allen mouse:3.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA013998
Hypothalamus mean intensity 165.156
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 94.146
Mammillary nucleus 51.880
Periventricular hypothalamic nucleus 157.383
Supraoptic nucleus -
Tuberal nucleus 61.668
Ventral tuberomammillary nucleus -
Lateral preoptic area 73.360
Medial preoptic area 75.874
Suprachiasmatic nucleus 19.874
Paraventricular hypothalamic nucleus 90.931
Anterior hypothalamic area, central 87.086
Ventral medial hypothalamic nucleus 88.306
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 141.497
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 59.370
Dorsal medial hypothalamic nucleus 92.991
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 98.0
2226 Male, age 75, left hemisphere 106.9
1961 Female, age 42, unknown 89.1
Dorsomedial nucleus
nTPM: 72.1
1989 Male, age 62, unknown 92.8
2017 Female, age 42, unknown 67.7
2041 Female, age 72, unknown 55.8
Lateral hypothalamic area
nTPM: 87.6
2228 Male, age 66, unknown 115.2
2412 Male, age 62, unknown 95.9
1791 Male, age 80, right hemisphere 77.7
2271 Male, age 75, both hemispheres 61.8
Mammillary body
nTPM: 13.6
2413 Male, age 66, unknown 25.3
1945 Male, age 80, right hemisphere 18.3
1948 Female, age 72, unknown 10.0
1834 Female, age 42, unknown 8.5
1923 Female, age 72, unknown 5.6
Paraventricular nucleus
nTPM: 73.1
2700 Male, age 62, unknown 73.1
Preoptic area
nTPM: 66.8
1907 Male, age 80, right hemisphere 95.6
1861 Female, age 42, unknown 59.0
2414 Female, age 72, unknown 45.7
Supraoptic nucleus
nTPM: 55.1
2835 Female, age 72, unknown 72.0
1894 Female, age 72, unknown 51.0
2043 Male, age 62, unknown 42.1
Ventromedial nucleus
nTPM: 90.9
1822 Female, age 42, unknown 101.7
1982 Female, age 72, unknown 80.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 77.4
Samples: 257

Max nTPM: 183.4
Min nTPM: 4.7
Std nTPM: 33.7
Median nTPM: 74.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 183.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 180.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 176.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 172.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 162.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 162.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 154.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 152.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 146.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 143.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 143.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 142.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 141.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 137.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 128.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 127.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 126.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 126.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 125.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 124.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 122.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 121.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 121.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 120.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 120.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 120.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 120.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 118.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 116.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 115.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 114.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 113.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 113.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 113.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 113.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 112.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 112.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 111.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 111.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 110.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 108.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 106.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 106.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 106.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 106.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 105.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 104.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 104.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 104.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 104.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 104.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 103.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 103.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 103.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 103.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 103.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 102.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 101.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 100.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 100.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 100.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 99.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 99.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 99.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 98.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 97.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 97.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 96.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 96.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 96.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 94.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 94.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 93.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 93.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 92.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 92.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 91.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 91.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 91.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 90.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 90.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 90.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 90.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 90.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 90.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 89.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 89.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 89.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 89.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 89.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 88.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 88.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 88.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 87.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 87.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 87.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 87.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 86.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 86.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 85.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 85.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 85.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 85.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 85.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 84.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 84.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 83.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 82.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 82.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 82.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 82.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 82.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 80.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 79.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 79.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 79.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 79.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 79.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 78.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 78.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 78.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 78.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 77.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 77.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 76.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 76.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 75.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 75.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 74.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 74.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 74.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 73.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 73.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 73.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 73.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 72.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 72.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 72.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 72.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 72.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 72.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 72.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 71.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 71.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 71.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 71.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 71.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 71.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 70.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 70.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 70.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 70.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 69.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 69.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 68.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 68.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 68.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 67.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 67.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 67.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 66.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 66.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 66.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 66.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 65.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 65.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 65.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 65.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 64.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 64.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 63.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 63.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 63.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 63.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 63.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 62.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 62.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 62.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 62.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 61.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 60.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 60.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 56.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 56.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 56.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 55.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 55.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 54.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 53.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 53.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 52.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 52.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 52.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 52.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 50.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 50.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 50.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 50.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 50.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 50.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 49.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 49.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 49.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 49.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 48.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 48.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 48.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 48.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 48.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 47.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 47.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 44.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 44.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 43.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 43.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 43.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 42.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 42.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 41.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 41.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 41.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 40.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 40.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 39.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 38.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 38.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 36.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 36.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 35.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 35.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 34.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 34.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 33.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 31.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 30.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 30.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 28.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 27.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 27.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 26.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 25.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 25.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 24.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 23.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 23.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 23.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 22.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 21.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 21.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 20.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 17.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 17.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 17.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 16.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 16.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 13.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 4.7
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 37.4
Samples: 4

Max nTPM: 40.4
Min nTPM: 32.4
Sample A Male 39.8
Sample B Male 40.4
Sample C Female 32.4
Sample D Female 37.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.4
69671905 Antisense, RP_050428_02_F01, Mouse strain C57BL/6J (56 days, male) 3.9
73788010 Antisense, RP_051213_01_A05, Mouse strain C57BL/6J (56 days, male) 2.9

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