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RAB11A
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  • TISSUE

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  • RAB11A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:125.7 nTPM
HPA Brain:150.5 nTPM
GTEx:125.7 nTPM
Pig:98.2 nTPM
Mouse:136.4 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 141.8
2226 Male, age 75, left hemisphere 180.1
1961 Female, age 42, unknown 103.4
Dorsomedial nucleus
nTPM: 103.2
2041 Female, age 72, unknown 114.0
1989 Male, age 62, unknown 108.1
2017 Female, age 42, unknown 87.5
Lateral hypothalamic area
nTPM: 150.5
2228 Male, age 66, unknown 180.4
1791 Male, age 80, right hemisphere 161.7
2271 Male, age 75, both hemispheres 152.6
2412 Male, age 62, unknown 107.4
Mammillary body
nTPM: 134.5
1923 Female, age 72, unknown 198.3
2413 Male, age 66, unknown 139.9
1948 Female, age 72, unknown 117.4
1945 Male, age 80, right hemisphere 111.4
1834 Female, age 42, unknown 105.4
Paraventricular nucleus
nTPM: 102.6
2700 Male, age 62, unknown 102.6
Preoptic area
nTPM: 112.1
1907 Male, age 80, right hemisphere 140.4
2414 Female, age 72, unknown 101.6
1861 Female, age 42, unknown 94.1
Supraoptic nucleus
nTPM: 119.0
1894 Female, age 72, unknown 150.9
2835 Female, age 72, unknown 107.3
2043 Male, age 62, unknown 98.9
Ventromedial nucleus
nTPM: 124.0
1982 Female, age 72, unknown 135.0
1822 Female, age 42, unknown 112.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 125.7
Samples: 257

Max nTPM: 277.6
Min nTPM: 55.6
Std nTPM: 32.4
Median nTPM: 125.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 277.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 207.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 204.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 201.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 199.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 190.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 189.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 185.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 184.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 184.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 178.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 177.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 177.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 177.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 176.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 174.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 174.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 174.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 174.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 173.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 173.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 171.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 171.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 171.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 171.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 170.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 167.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 166.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 165.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 164.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 163.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 163.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 162.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 161.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 161.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 159.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 158.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 157.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 157.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 157.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 157.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 156.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 156.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 155.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 155.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 154.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 154.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 153.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 153.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 153.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 153.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 152.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 152.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 152.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 152.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 151.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 150.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 150.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 149.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 148.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 148.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 148.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 148.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 148.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 148.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 148.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 147.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 147.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 147.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 146.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 145.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 145.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 145.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 144.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 143.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 143.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 143.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 142.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 141.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 139.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 139.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 138.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 138.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 138.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 137.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 137.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 137.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 137.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 137.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 137.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 137.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 136.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 136.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 136.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 136.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 136.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 136.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 135.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 135.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 135.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 134.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 134.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 134.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 134.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 133.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 133.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 133.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 133.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 132.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 132.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 132.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 132.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 132.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 131.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 131.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 131.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 131.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 131.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 130.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 130.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 130.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 130.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 127.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 126.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 126.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 126.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 126.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 125.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 125.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 124.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 124.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 122.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 121.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 120.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 120.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 120.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 119.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 119.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 119.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 119.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 119.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 118.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 118.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 117.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 117.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 117.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 117.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 116.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 116.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 116.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 116.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 116.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 114.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 114.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 114.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 114.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 114.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 113.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 113.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 113.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 112.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 112.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 112.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 112.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 110.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 110.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 110.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 110.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 110.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 109.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 109.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 109.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 108.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 108.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 107.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 107.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 107.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 107.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 107.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 105.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 105.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 105.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 105.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 104.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 104.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 103.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 103.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 102.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 102.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 102.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 102.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 101.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 101.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 100.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 100.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 100.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 100.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 99.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 99.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 99.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 99.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 98.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 98.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 97.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 97.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 97.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 97.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 96.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 96.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 93.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 93.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 93.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 93.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 92.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 91.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 91.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 90.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 90.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 90.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 89.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 89.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 88.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 88.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 88.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 88.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 88.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 88.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 87.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 86.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 86.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 86.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 85.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 85.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 84.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 84.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 83.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 82.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 80.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 80.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 79.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 79.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 78.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 76.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 76.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 76.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 75.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 74.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 73.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 73.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 73.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 70.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 70.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 69.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 67.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 66.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 61.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 55.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

98.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 98.2
Samples: 4

Max nTPM: 127.3
Min nTPM: 80.2
Sample A Female 127.3
Sample B Female 98.1
Sample C Male 87.1
Sample D Male 80.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 136.4
Samples: 4

Max nTPM: 144.1
Min nTPM: 129.0
Sample A Male 132.6
Sample B Male 144.1
Sample C Female 140.0
Sample D Female 129.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
71724017 Antisense, RP_050921_01_D03, Mouse strain C57BL/6J (56 days, male) 0.0

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