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  • TISSUE

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  • STMN2
TISSUE HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:415.4 nTPM
HPA Brain:804.1 nTPM
GTEx:415.4 nTPM
Pig:536.5 nTPM
Mouse:425.2 nTPM
Allen mouse:17.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

804.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 647.9
2226 Male, age 75, left hemisphere 1037.5
1961 Female, age 42, unknown 258.4
Dorsomedial nucleus
nTPM: 247.2
1989 Male, age 62, unknown 290.2
2041 Female, age 72, unknown 270.4
2017 Female, age 42, unknown 181.0
Lateral hypothalamic area
nTPM: 804.1
2271 Male, age 75, both hemispheres 1419.7
2228 Male, age 66, unknown 990.7
1791 Male, age 80, right hemisphere 497.6
2412 Male, age 62, unknown 308.3
Mammillary body
nTPM: 301.0
1923 Female, age 72, unknown 431.3
2413 Male, age 66, unknown 430.5
1948 Female, age 72, unknown 253.7
1945 Male, age 80, right hemisphere 198.7
1834 Female, age 42, unknown 190.6
Paraventricular nucleus
nTPM: 284.6
2700 Male, age 62, unknown 284.6
Preoptic area
nTPM: 298.9
1907 Male, age 80, right hemisphere 444.5
2414 Female, age 72, unknown 254.8
1861 Female, age 42, unknown 197.5
Supraoptic nucleus
nTPM: 205.4
2835 Female, age 72, unknown 247.5
1894 Female, age 72, unknown 217.3
2043 Male, age 62, unknown 151.2
Ventromedial nucleus
nTPM: 366.9
1982 Female, age 72, unknown 431.6
1822 Female, age 42, unknown 302.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

415.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 415.4
Samples: 257

Max nTPM: 1205.6
Min nTPM: 15.1
Std nTPM: 217.4
Median nTPM: 402.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1205.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 1190.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1040.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 981.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 974.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 932.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 915.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 914.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 823.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 795.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 795.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 781.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 774.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 763.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 751.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 733.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 728.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 728.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 722.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 711.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 698.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 697.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 691.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 690.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 690.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 680.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 678.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 674.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 673.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 672.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 670.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 667.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 653.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 653.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 652.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 650.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 650.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 649.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 646.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 643.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 633.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 629.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 629.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 628.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 621.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 621.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 611.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 609.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 608.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 607.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 600.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 598.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 591.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 584.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 582.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 581.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 580.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 578.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 576.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 576.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 573.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 573.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 572.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 571.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 568.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 568.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 567.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 558.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 552.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 549.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 549.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 538.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 537.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 537.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 531.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 530.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 527.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 525.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 523.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 515.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 511.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 509.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 509.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 506.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 500.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 497.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 496.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 495.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 493.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 491.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 490.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 490.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 487.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 487.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 486.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 485.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 484.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 470.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 462.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 460.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 458.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 457.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 455.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 455.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 451.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 448.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 447.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 445.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 443.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 440.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 439.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 437.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 437.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 434.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 434.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 434.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 433.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 431.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 431.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 428.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 421.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 419.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 418.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 414.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 413.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 404.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 404.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 403.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 402.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 401.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 400.6
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 394.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 392.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 382.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 380.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 380.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 377.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 373.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 372.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 372.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 370.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 366.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 365.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 363.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 361.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 360.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 356.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 355.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 350.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 349.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 342.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 340.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 333.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 329.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 323.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 322.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 322.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 321.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 320.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 319.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 319.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 319.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 319.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 314.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 312.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 309.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 308.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 307.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 306.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 304.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 304.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 303.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 302.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 301.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 300.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 299.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 292.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 286.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 283.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 283.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 278.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 276.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 274.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 274.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 274.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 271.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 271.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 268.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 268.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 266.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 265.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 263.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 259.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 256.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 256.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 246.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 243.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 240.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 240.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 236.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 234.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 233.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 226.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 225.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 223.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 221.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 221.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 218.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 218.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 216.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 215.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 213.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 212.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 208.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 206.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 206.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 205.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 194.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 190.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 184.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 175.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 175.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 172.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 168.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 164.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 163.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 158.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 156.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 153.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 145.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 133.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 131.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 130.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 128.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 127.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 123.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 123.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 122.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 115.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 105.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 99.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 98.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 98.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 96.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 91.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 84.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 82.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 81.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 78.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 77.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 69.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 58.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 50.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 35.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 28.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 18.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 15.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

536.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 536.5
Samples: 4

Max nTPM: 713.4
Min nTPM: 399.5
Sample A Female 713.4
Sample B Female 518.8
Sample C Male 399.5
Sample D Male 514.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

425.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 425.2
Samples: 4

Max nTPM: 453.2
Min nTPM: 403.2
Sample A Male 403.2
Sample B Male 439.9
Sample C Female 453.2
Sample D Female 404.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

17.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 17.4
74819695 Antisense, RP_060315_02_H11, Mouse strain C57BL/6J (56 days, male) 18.1
69173415 Antisense, RP_050329_01_E10, Mouse strain C57BL/6J (56 days, male) 16.7

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