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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • BLOOD

  • CELL LINE

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  • EVOLUTION

  • EEF1D
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:103.7 nTPM
GTEx:233.0 nTPM
FANTOM5:37.1 Scaled Tags Per Million
Macaque:37.2 nTPM
Pig:37.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.7
Sample id Sample description nTPM
Putamen
nTPM: 103.7
2647 Male, age 75, left hemisphere 134.0
2489 Female, age 72, unknown 126.6
2482 Female, age 94, left hemisphere 100.2
2466 Female, age 79, unknown 98.5
1829 Male, age 74, unknown 95.4
1937 Female, age 91, right hemisphere 89.3
1838 Male, age 80, right hemisphere 82.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

233.0
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 233.0
Samples: 254

Max nTPM: 657.4
Min nTPM: 64.0
Std nTPM: 86.1
Median nTPM: 212.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 657.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 520.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 516.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 508.9
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 495.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 463.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 463.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 455.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 434.7
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 431.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 429.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 421.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 414.8
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 401.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 376.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 372.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 367.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 366.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 363.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 361.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 359.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 359.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 359.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 359.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 358.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 355.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 353.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 350.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 342.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 340.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 338.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 327.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 326.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 323.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 323.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 318.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 315.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 311.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 309.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 309.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 307.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 306.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 303.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 299.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 298.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 297.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 297.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 297.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 296.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 294.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 294.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 289.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 289.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 289.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 288.8
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 287.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 286.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 283.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 283.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 282.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 276.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 274.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 271.0
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 270.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 269.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 268.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 268.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 267.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 266.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 265.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 264.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 262.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 260.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 260.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 258.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 257.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 256.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 251.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 249.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 249.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 248.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 248.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 246.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 246.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 245.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 244.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 244.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 244.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 243.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 241.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 241.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 238.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 238.4
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 236.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 236.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 236.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 234.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 233.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 232.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 230.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 230.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 228.7
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 228.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 228.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 227.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 227.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 227.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 227.5
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 224.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 223.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 223.8
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 223.7
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 223.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 222.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 221.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 219.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 217.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 217.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 216.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 216.4
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 216.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 215.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 215.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 214.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 214.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 213.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 213.0
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 212.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 211.9
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 211.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 209.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 209.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 208.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 208.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 208.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 208.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 207.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 205.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 204.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 203.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 203.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 203.2
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 202.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 202.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 202.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 201.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 201.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 201.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 200.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 200.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 199.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 197.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 196.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 196.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 195.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 194.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 194.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 194.1
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 193.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 193.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 193.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 192.6
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 191.4
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 191.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 190.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 189.6
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 189.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 188.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 188.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 186.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 186.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 185.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 184.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 184.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 184.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 184.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 181.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 181.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 180.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 179.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 178.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 178.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 178.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 177.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 177.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 177.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 176.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 176.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 175.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 174.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 174.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 173.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 172.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 171.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 171.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 170.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 169.6
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 168.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 168.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 167.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 167.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 166.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 166.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 164.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 164.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 164.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 163.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 163.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 162.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 160.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 159.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 159.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 158.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 158.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 157.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 156.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 154.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 154.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 153.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 152.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 152.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 151.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 150.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 150.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 150.1
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 149.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 148.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 147.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 147.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 145.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 143.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 143.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 143.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 142.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 141.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 141.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 140.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 140.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 138.4
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 138.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 137.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 137.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 137.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 132.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 129.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 128.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 128.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 127.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 113.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 112.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 110.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 110.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 93.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 64.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

37.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 37.1
FF:10176-103C5 60 years, female 37.1

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.2
Macaque sample Sample description nTPM
Putamen
nTPM: 37.2
Samples: 2

Max nTPM: 37.7
Min nTPM: 36.7
Sample A 37.7
Sample B 36.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.8
Pig sample Sample description nTPM
Putamen
nTPM: 37.8
Samples: 3

Max nTPM: 44.0
Min nTPM: 27.7
Sample B Female 27.7
Sample C Male 44.0
Sample D Male 41.6

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