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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • ECH1
EVOLUTIONARY LIVER Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Liver & Gallbladder
Evolutionary methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Medium
Hepatocytes: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:615.3 nTPM
HPA:307.3 nTPM
GTEx:615.3 nTPM
FANTOM5:749.3 Scaled Tags Per Million
Macaque:214.4 nTPM
Pig:47.9 nTPM
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA005835
Cholangiocytes Medium
Hepatocytes High



LIVER - PROTEINTALKS DB MS
Median intensity 343783
Sample Intensity
Liver_01
628967
Liver_02
36165
Liver_03
614048
Liver_04
592790
Liver_05
760099
Liver_06
537953
Liver_07
101854
Liver_08
149614
Liver_09
58373
Liver_10
69651

LIVER - MANN MS
Median intensity 409188957
Replicate Intensity
Liver_01
441252975
Liver_02
409188957
Liver_03
381087125

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

307.3
N/A
Female, age 60
Liver sample 21
nTPM: 401.6
overview
Male, age 54
Liver sample 23
nTPM: 310.1
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 468.3
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 193.3
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 189.2
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 283.6
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 339.2
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 307.2
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 262.6
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 317.9
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

615.3
GTEx sample id Sample description nTPM
Liver
Average nTPM: 615.3
Samples: 262

Max nTPM: 1684.9
Min nTPM: 42.7
Std nTPM: 274.9
Median nTPM: 573.3
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 1684.9
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 1439.0
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 1365.4
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 1319.9
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 1285.1
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 1208.3
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 1199.4
GTEX-P78B-1326-SM-3P611 40-49 years, female 1179.7
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 1175.4
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 1155.9
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 1154.2
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 1145.7
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 1145.1
GTEX-R53T-0326-SM-48FEC 50-59 years, female 1126.2
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 1110.3
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 1109.6
GTEX-18A66-2026-SM-7189C 60-69 years, male 1103.7
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 1103.1
GTEX-14PHX-0526-SM-664NW 50-59 years, male 1071.4
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 1032.2
GTEX-17HHE-0126-SM-79398 50-59 years, male 1017.0
GTEX-QESD-2026-SM-447BI 20-29 years, male 1011.5
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 1007.4
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 998.7
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 993.1
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 973.0
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 973.0
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 971.1
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 962.6
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 955.4
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 947.1
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 929.8
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 927.5
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 923.6
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 921.2
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 918.1
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 917.3
GTEX-13113-1326-SM-5GCOI 60-69 years, female 906.8
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 900.2
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 900.0
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 896.6
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 889.8
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 872.8
GTEX-18A7A-1526-SM-72D69 50-59 years, female 872.2
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 868.5
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 868.3
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 867.0
GTEX-14JG1-1626-SM-664NH 40-49 years, male 866.1
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 858.3
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 854.0
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 844.6
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 830.4
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 823.8
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 820.7
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 819.6
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 818.8
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 806.8
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 803.2
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 798.1
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 792.9
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 790.6
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 779.8
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 777.7
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 777.3
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 774.4
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 769.9
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 766.2
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 765.1
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 764.2
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 762.2
GTEX-RU72-1426-SM-46MUF 50-59 years, female 761.5
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 759.4
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 757.6
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 755.8
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 754.7
GTEX-14E7W-1526-SM-6871X 70-79 years, male 754.0
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 753.9
GTEX-18465-1626-SM-7LG6N 50-59 years, male 750.1
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 747.6
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 739.5
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 738.3
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 736.8
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 735.3
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 734.7
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 732.1
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 724.1
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 724.0
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 714.5
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 705.9
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 705.5
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 705.3
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 704.9
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 702.1
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 699.4
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 692.3
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 688.7
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 688.7
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 679.8
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 672.0
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 669.3
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 667.9
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 661.4
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 661.2
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 659.2
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 657.4
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 653.8
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 652.8
GTEX-YECK-1926-SM-4W21H 60-69 years, male 652.6
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 651.8
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 648.6
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 648.0
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 646.9
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 643.8
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 641.0
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 639.1
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 635.9
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 635.5
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 632.0
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 630.7
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 625.9
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 624.0
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 619.9
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 619.2
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 616.6
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 615.8
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 609.6
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 600.8
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 595.6
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 590.0
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 574.4
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 574.3
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 572.4
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 568.9
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 567.3
GTEX-11ZUS-2526-SM-59872 30-39 years, male 565.1
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 563.5
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 560.5
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 555.9
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 549.6
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 548.3
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 546.3
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 541.2
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 541.1
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 540.5
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 539.8
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 532.7
GTEX-RN64-1826-SM-48FDV 50-59 years, male 526.8
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 526.7
GTEX-1399T-0826-SM-5IFES 60-69 years, male 524.9
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 524.4
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 521.4
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 520.7
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 518.2
GTEX-13112-1426-SM-5EGH8 50-59 years, male 516.2
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 516.1
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 515.0
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 513.8
GTEX-S33H-1626-SM-4AD68 30-39 years, male 512.2
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 508.0
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 504.6
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 502.5
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 497.9
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 497.4
GTEX-11GSP-0626-SM-5986T 60-69 years, female 494.4
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 494.3
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 492.2
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 488.9
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 486.2
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 484.4
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 482.9
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 480.7
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 479.5
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 479.4
GTEX-17F96-1226-SM-79OK2 70-79 years, male 478.8
GTEX-1B932-1426-SM-793AN 40-49 years, female 477.8
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 477.6
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 476.8
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 476.2
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 475.7
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 475.6
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 475.6
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 474.4
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 468.5
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 463.9
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 461.5
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 459.9
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 459.8
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 459.2
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 453.0
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 451.8
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 450.5
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 450.3
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 447.3
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 446.7
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 446.1
GTEX-1B933-1226-SM-731DW 50-59 years, female 445.5
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 444.6
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 442.9
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 438.1
GTEX-12696-0826-SM-5EGGE 60-69 years, male 436.0
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 435.0
GTEX-111FC-1226-SM-HAV27 60-69 years, male 433.3
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 429.5
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 428.8
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 423.9
GTEX-Q734-0326-SM-48U15 40-49 years, female 422.5
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 422.5
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 411.4
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 411.3
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 411.2
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 404.3
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 401.8
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 394.4
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 389.6
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 387.8
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 383.3
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 383.2
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 376.7
GTEX-QEL4-1226-SM-447A4 50-59 years, male 366.3
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 365.7
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 356.7
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 354.5
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 351.6
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 347.6
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 332.5
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 324.6
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 322.6
GTEX-REY6-1226-SM-48FDR 60-69 years, male 314.5
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 312.9
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 309.2
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 304.0
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 297.7
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 293.2
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 291.7
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 273.9
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 269.9
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 269.8
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 268.4
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 257.0
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 251.4
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 242.9
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 222.8
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 221.1
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 212.7
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 210.3
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 210.2
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 201.2
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 193.6
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 187.7
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 181.6
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 174.9
GTEX-X261-1726-SM-4PQYT 50-59 years, male 174.6
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 169.3
GTEX-S32W-1926-SM-4AD63 50-59 years, female 167.4
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 155.5
GTEX-O5YV-0726-SM-EV798 60-69 years, female 153.4
GTEX-14PJO-1726-SM-68719 60-69 years, male 140.0
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 137.6
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 118.5
GTEX-14XAO-0226-SM-68728 60-69 years, female 80.3
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 77.0
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 42.7
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

749.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 749.3
FF:10018-101C9 64,69,70 years, mixed 749.3

LIVER - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

214.4
Macaque sample Sample description nTPM
Liver
nTPM: 214.4
Samples: 3

Max nTPM: 241.3
Min nTPM: 195.9
Sample B 241.3
Sample C 195.9
Sample D 206.0

LIVER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.9
Pig sample Sample description nTPM
Liver
nTPM: 47.9
Samples: 4

Max nTPM: 63.8
Min nTPM: 32.7
Sample A Female 32.7
Sample B Female 63.8
Sample C Male 47.5
Sample D Male 47.6

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