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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
75.5
nTPM
HPA Brain:
52.2
nTPM
GTEx:
75.5
nTPM
FANTOM5:
137.4
Scaled Tags Per Million
Pig:
194.0
nTPM
Mouse:
116.2
nTPM
Allen mouse:
14.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
52.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 49.2
1870
Female, age 42, unknown
56.9
2411
Female, age 72, unknown
52.7
1827
Male, age 72, unknown
51.0
1833
Male, age 53, unknown
50.2
2019
Male, age 18, unknown
48.8
2828
Female, age 72, unknown
48.6
2666
Male, age 74, left hemisphere
47.9
2219
Male, age 76, both hemispheres
47.6
1830
Male, age 51, unknown
46.7
2586
Male, age 75, left hemisphere
41.2
Dorsal raphe nucleus nTPM: 51.4
2298
Female, age 72, unknown
54.7
2750
Male, age 76, both hemispheres
53.9
2016
Female, age 72, unknown
51.3
1828
Male, age 53, unknown
50.6
2047
Male, age 72, unknown
46.6
Inferior colliculus nTPM: 51.5
2849
Male, age 72, unknown
56.1
2097
Female, age 72, unknown
52.5
1890
Male, age 53, unknown
50.5
1848
Female, age 42, unknown
46.8
Median raphe nucleus nTPM: 49.0
2220
Male, age 76, midline
49.0
Periaquaductal grey, anterior nTPM: 51.5
1947
Male, age 18, unknown
53.7
2502
Female, age 75, unknown
53.5
1795
Male, age 51, unknown
47.3
Periaquaductal grey, dorsal nTPM: 50.4
2850
Male, age 76, both hemispheres
58.7
1840
Male, age 53, unknown
50.5
2464
Female, age 72, unknown
46.7
1831
Male, age 72, unknown
45.7
Periaquaductal grey, lateral nTPM: 47.9
2140
Male, age 76, both hemispheres
51.0
2053
Male, age 18, unknown
47.0
2272
Male, age 74, both hemispheres
45.6
Pretectal area nTPM: 52.1
2667
Female, age 75, unknown
57.2
1817
Female, age 42, unknown
56.4
2007
Male, age 72, unknown
55.1
1815
Male, age 53, unknown
54.0
2224
Female, age 72, unknown
53.9
2273
Male, age 74, both hemispheres
52.9
2316
Male, age 76, right hemisphere
52.0
1816
Male, age 51, unknown
51.6
2825
Male, age 18, unknown
50.0
1944
Female, age 72, unknown
46.9
2407
Male, age 75, both hemispheres
42.7
Red nucleus nTPM: 52.2
1821
Female, age 72, unknown
59.3
1865
Male, age 51, unknown
57.7
2769
Male, age 72, unknown
56.1
2503
Female, age 72, unknown
55.5
2725
Female, age 75, unknown
54.8
1954
Female, age 42, unknown
54.4
1904
Male, age 53, unknown
52.4
2785
Male, age 18, unknown
50.3
2823
Male, age 76, right hemisphere
50.3
2227
Male, age 72, unknown
49.8
2588
Male, age 74, left hemisphere
47.3
2584
Male, age 75, left hemisphere
38.6
Substantia nigra nTPM: 48.4
1916
Female, age 42, unknown
52.3
1851
Male, age 51, unknown
52.1
1889
Female, age 72, unknown
51.8
2699
Male, age 18, unknown
51.1
2409
Female, age 72, unknown
50.8
2665
Male, age 74, both hemispheres
47.0
1941
Male, age 53, unknown
46.0
2583
Male, age 75, right hemisphere
45.3
2590
Female, age 75, unknown
45.0
2241
Male, age 72, unknown
43.1
Superior colliculus nTPM: 48.6
1895
Male, age 76, right hemisphere
56.1
1913
Female, age 42, unknown
56.1
1796
Male, age 53, unknown
52.6
1995
Male, age 72, unknown
52.2
2587
Male, age 74, left hemisphere
51.1
1839
Male, age 51, unknown
50.1
2261
Male, age 18, unknown
47.5
2087
Female, age 72, unknown
44.4
2668
Female, age 75, unknown
42.6
2664
Male, age 75, both hemispheres
32.8
Ventral tegmental area nTPM: 47.4
2410
Female, age 72, unknown
50.5
2218
Male, age 76, both hemispheres
50.0
1915
Female, age 42, unknown
48.8
2223
Female, age 72, unknown
48.5
1942
Male, age 51, unknown
43.3
2021
Male, age 53, unknown
43.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
75.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 75.5
Samples: 139
Max nTPM: 123.5
Min nTPM: 51.6
Std nTPM: 12.5
Median nTPM: 74.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
123.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
109.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
106.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
105.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
103.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
103.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
102.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
102.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
99.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
96.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
94.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
94.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
94.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
90.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
89.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
89.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
89.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
89.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
88.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
88.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
88.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
88.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
87.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
87.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
86.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
86.0
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
85.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
85.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
85.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
84.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
84.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
83.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
82.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
82.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
82.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
81.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
81.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
81.3
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
80.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
80.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
79.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
79.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
79.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
79.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
78.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
78.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
78.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
78.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
78.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
78.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
78.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
78.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
78.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
77.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
76.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
76.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
76.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
76.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
76.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
76.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
76.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
75.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
75.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
75.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
74.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
74.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
74.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
74.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
74.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
74.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
74.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
73.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
73.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
72.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
72.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
72.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
72.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
72.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
71.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
71.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
71.5
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
71.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
71.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
71.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
70.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
70.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
70.5
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
69.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
69.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
69.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
69.6
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
69.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
69.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
68.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
68.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
68.4
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
68.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
68.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
67.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
67.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
67.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
67.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
67.1
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
66.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
66.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
66.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
66.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
66.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
65.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
65.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
65.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
65.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
64.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
64.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
64.2
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
63.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
63.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
63.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
62.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
62.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
62.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
62.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
62.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
62.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
62.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
62.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
61.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
58.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
58.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
58.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
58.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
57.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
57.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
57.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
57.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
57.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
55.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
54.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
51.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
116.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 116.3
Samples: 4
Max nTPM: 121.8
Min nTPM: 108.0
Sample A
Male
116.7
Sample B
Male
121.8
Sample C
Female
108.0
Sample D
Female
118.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.