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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • TUBB4A
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:680.2 nTPM
GTEx:442.5 nTPM
FANTOM5:914.8 Scaled Tags Per Million
Macaque:327.5 nTPM
Pig:1267.2 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

680.2
Sample id Sample description nTPM
Putamen
nTPM: 680.2
1829 Male, age 74, unknown 881.3
2647 Male, age 75, left hemisphere 694.5
2466 Female, age 79, unknown 692.1
2482 Female, age 94, left hemisphere 686.3
2489 Female, age 72, unknown 638.5
1937 Female, age 91, right hemisphere 625.4
1838 Male, age 80, right hemisphere 543.6

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

442.5
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 442.5
Samples: 254

Max nTPM: 1539.3
Min nTPM: 71.9
Std nTPM: 214.0
Median nTPM: 426.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1539.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1227.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1023.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 995.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 984.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 963.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 881.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 871.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 860.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 818.6
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 811.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 806.0
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 801.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 800.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 797.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 794.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 784.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 776.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 766.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 765.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 762.9
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 750.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 747.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 742.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 734.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 734.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 720.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 713.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 705.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 704.4
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 703.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 700.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 698.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 683.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 673.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 664.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 659.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 653.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 647.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 647.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 638.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 636.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 636.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 630.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 627.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 624.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 619.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 618.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 614.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 613.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 608.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 603.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 592.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 590.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 584.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 584.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 578.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 574.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 572.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 566.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 565.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 564.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 558.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 557.2
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 556.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 555.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 553.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 552.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 546.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 546.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 539.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 536.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 533.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 532.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 532.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 529.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 519.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 517.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 508.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 508.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 505.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 505.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 504.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 501.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 501.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 500.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 500.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 498.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 495.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 492.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 490.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 490.4
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 490.2
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 489.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 489.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 486.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 483.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 482.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 479.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 479.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 476.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 474.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 474.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 473.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 471.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 468.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 467.5
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 466.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 461.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 460.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 460.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 456.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 456.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 454.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 449.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 441.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 441.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 441.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 439.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 438.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 438.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 435.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 435.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 433.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 429.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 427.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 427.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 425.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 423.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 422.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 421.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 421.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 417.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 415.0
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 414.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 412.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 408.1
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 407.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 405.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 397.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 396.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 396.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 393.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 393.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 380.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 379.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 379.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 376.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 375.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 373.5
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 373.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 371.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 371.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 370.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 366.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 365.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 364.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 362.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 358.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 348.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 348.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 346.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 340.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 340.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 339.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 333.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 332.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 331.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 329.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 326.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 323.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 323.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 320.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 317.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 307.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 307.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 306.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 302.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 301.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 299.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 299.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 297.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 297.0
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 294.4
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 292.6
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 291.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 290.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 289.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 283.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 282.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 279.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 279.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 278.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 275.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 275.1
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 274.6
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 272.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 271.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 271.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 268.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 267.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 266.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 266.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 263.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 261.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 261.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 260.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 258.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 255.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 254.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 253.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 252.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 251.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 248.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 244.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 240.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 234.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 229.3
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 227.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 227.3
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 220.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 218.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 217.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 216.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 213.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 204.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 200.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 188.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 172.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 172.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 171.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 168.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 168.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 159.4
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 159.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 157.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 156.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 151.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 135.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 135.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 134.2
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 134.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 133.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 132.3
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 129.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 123.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 116.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 116.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 114.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 114.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 111.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 109.3
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 94.1
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 71.9
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

914.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 914.8
FF:10176-103C5 60 years, female 914.8

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

327.5
Macaque sample Sample description nTPM
Putamen
nTPM: 327.5
Samples: 2

Max nTPM: 345.0
Min nTPM: 310.0
Sample A 310.0
Sample B 345.0

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1267.2
Pig sample Sample description nTPM
Putamen
nTPM: 1267.2
Samples: 3

Max nTPM: 2127.9
Min nTPM: 747.4
Sample B Female 747.4
Sample C Male 926.4
Sample D Male 2127.9

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