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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • CELL LINE

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  • FCGRT
EVOLUTIONARY LIVER Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Liver & Gallbladder
Evolutionary methods
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:395.4 nTPM
HPA:265.4 nTPM
GTEx:395.4 nTPM
FANTOM5:310.7 Scaled Tags Per Million
Pig:283.9 nTPM
LIVER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA012122Antibody HPA015130
Cholangiocytes Not detectedNot detected
Hepatocytes LowNot detected





LIVER - PROTEINTALKS DB MS
Median intensity 8595
Sample Intensity
Liver_01
9258
Liver_02
7774
Liver_03
9045
Liver_04
11138
Liver_05
10522
Liver_06
10470
Liver_07
8146
Liver_08
6776
Liver_09
6898
Liver_10
4637

LIVER - MANN MS
Median intensity 4744109
Replicate Intensity
Liver_01
6116787
Liver_02
3301123
Liver_03
4744109

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

265.4
N/A
Female, age 60
Liver sample 21
nTPM: 245.8
overview
Male, age 54
Liver sample 23
nTPM: 221.6
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 274.6
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 200.5
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 239.5
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 248
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 206
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 422.6
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 265.2
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 329.6
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

395.4
GTEx sample id Sample description nTPM
Liver
Average nTPM: 395.4
Samples: 262

Max nTPM: 1119.1
Min nTPM: 62.7
Std nTPM: 157.9
Median nTPM: 388.8
GTEX-N7MS-1825-SM-HLJR9 60-69 years, male 1119.1
GTEX-1IDJH-1526-SM-GA8ZW 70-79 years, male 1022.1
GTEX-111FC-1226-SM-HAV27 60-69 years, male 728.8
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 722.8
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 714.0
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 707.7
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 684.3
GTEX-11ZUS-2526-SM-59872 30-39 years, male 676.6
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 671.3
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 664.7
GTEX-16YQH-1126-SM-HAV2D 30-39 years, male 660.0
GTEX-13G51-0626-SM-HK7AV 60-69 years, male 655.2
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 654.7
GTEX-18465-1626-SM-7LG6N 50-59 years, male 641.1
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 636.1
GTEX-YECK-1926-SM-4W21H 60-69 years, male 634.1
GTEX-WK11-1326-SM-4M9QU 50-59 years, male 615.3
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 612.4
GTEX-SIU8-1226-SM-HLJRG 50-59 years, male 609.1
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 607.6
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 606.0
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 605.4
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 603.0
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 594.7
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 592.3
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 589.0
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 588.1
GTEX-QESD-2026-SM-447BI 20-29 years, male 580.6
GTEX-O5YW-0826-SM-HK7A3 50-59 years, male 576.9
GTEX-14JG1-1626-SM-664NH 40-49 years, male 576.7
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 572.8
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 571.7
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 571.4
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 570.8
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 570.5
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 566.8
GTEX-13OVL-0726-SM-HAV29 50-59 years, male 563.5
GTEX-14A6H-0726-SM-HAV28 30-39 years, male 563.1
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 561.1
GTEX-1LSNL-2026-SM-HLJQ4 50-59 years, male 558.1
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 558.0
GTEX-1RQED-0726-SM-HLJQL 60-69 years, male 556.5
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 556.4
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 549.2
GTEX-1H1CY-1026-SM-HLJS4 60-69 years, female 548.0
GTEX-14E7W-1526-SM-6871X 70-79 years, male 544.3
GTEX-RN64-1826-SM-48FDV 50-59 years, male 544.2
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 543.7
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 543.4
GTEX-1OJC4-1126-SM-HLJQI 50-59 years, female 537.8
GTEX-15CHQ-0926-SM-HAV1W 60-69 years, male 537.4
GTEX-13112-1426-SM-5EGH8 50-59 years, male 537.0
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 536.2
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 534.6
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 533.1
GTEX-1I1GV-1026-SM-GA8Z8 60-69 years, male 527.3
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 524.8
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 522.9
GTEX-QXCU-1826-SM-HLJS6 50-59 years, male 520.4
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 518.9
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 517.0
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 516.6
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 516.3
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 505.7
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 502.9
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 500.1
GTEX-144GL-1426-SM-5O9BO 50-59 years, male 499.4
GTEX-WL46-1726-SM-HAUZC 50-59 years, male 499.0
GTEX-S7SE-1326-SM-HLJRN 50-59 years, male 496.5
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 496.5
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 495.0
GTEX-1PPGY-2226-SM-F2I29 60-69 years, male 493.3
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 489.6
GTEX-1HCU6-2026-SM-GA91U 60-69 years, female 487.3
GTEX-18A7A-1526-SM-72D69 50-59 years, female 485.5
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 475.2
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 473.9
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 473.3
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 471.6
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 471.1
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 470.8
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 468.0
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 467.9
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 467.2
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 466.5
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 465.1
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 462.9
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 461.0
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 460.4
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 460.2
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 460.0
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 456.9
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 456.4
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 455.5
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 454.5
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 453.3
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 452.6
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 450.2
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 447.0
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 445.7
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 445.2
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 444.9
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 444.1
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 434.5
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 430.7
GTEX-17HHE-0126-SM-79398 50-59 years, male 429.4
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 426.0
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 426.0
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 425.4
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 425.2
GTEX-11EMC-0326-SM-HAV2K 60-69 years, female 424.3
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 420.8
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 419.9
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 419.0
GTEX-W5X1-0126-SM-HLJRF 40-49 years, female 417.5
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 415.7
GTEX-16Z82-1426-SM-HAV2I 60-69 years, male 415.5
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 413.7
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 409.7
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 408.7
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 407.3
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 405.9
GTEX-R53T-0326-SM-48FEC 50-59 years, female 405.9
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 405.3
GTEX-1R9PM-0526-SM-F2I1T 20-29 years, male 404.5
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 402.8
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 401.1
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 397.9
GTEX-WWYW-1026-SM-GQ1CM 50-59 years, female 395.0
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 391.7
GTEX-11GSP-0626-SM-5986T 60-69 years, female 390.1
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 387.5
GTEX-OXRK-1226-SM-HLJR8 50-59 years, female 387.1
GTEX-P78B-1326-SM-3P611 40-49 years, female 383.1
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 382.5
GTEX-XPVG-1126-SM-HLJRE 50-59 years, male 379.8
GTEX-14BIL-1326-SM-5O9CZ 50-59 years, male 379.6
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 377.4
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 376.5
GTEX-1B933-1226-SM-731DW 50-59 years, female 376.3
GTEX-1S3DN-1126-SM-HLJQO 50-59 years, male 372.8
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 372.1
GTEX-13S7M-1126-SM-HAV2A 60-69 years, female 370.5
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 370.3
GTEX-Y3IK-0326-SM-HLJRD 50-59 years, female 369.5
GTEX-16MT8-2126-SM-HAV1Q 60-69 years, female 369.1
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 367.8
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 367.3
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 367.1
GTEX-1LB8K-1926-SM-HLJQQ 50-59 years, male 365.9
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 365.4
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 364.2
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 364.2
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 364.0
GTEX-OIZF-0826-SM-7MKH9 60-69 years, male 362.5
GTEX-1399T-0826-SM-5IFES 60-69 years, male 360.4
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 359.2
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 359.0
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 357.5
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 355.6
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 355.1
GTEX-RU72-1426-SM-46MUF 50-59 years, female 352.1
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 350.7
GTEX-S33H-1626-SM-4AD68 30-39 years, male 341.5
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 340.4
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 340.0
GTEX-REY6-1226-SM-48FDR 60-69 years, male 338.8
GTEX-14PHX-0526-SM-664NW 50-59 years, male 335.8
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 330.7
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 329.9
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 325.1
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 324.8
GTEX-Q734-0326-SM-48U15 40-49 years, female 324.3
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 318.4
GTEX-18A66-2026-SM-7189C 60-69 years, male 316.6
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 315.1
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 314.8
GTEX-OHPM-0826-SM-HLJRC 50-59 years, male 313.7
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 299.8
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 299.6
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 298.8
GTEX-1H1DF-1326-SM-9WPPR 40-49 years, female 296.4
GTEX-17F96-1226-SM-79OK2 70-79 years, male 295.9
GTEX-1B932-1426-SM-793AN 40-49 years, female 293.4
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 292.5
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 291.7
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 290.8
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 289.5
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 288.2
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 287.6
GTEX-12696-0826-SM-5EGGE 60-69 years, male 286.6
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 286.4
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 285.5
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 284.2
GTEX-13113-1326-SM-5GCOI 60-69 years, female 282.5
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 277.2
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 274.2
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 274.2
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 273.2
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 262.8
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 257.4
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 257.3
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 256.4
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 253.4
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 253.4
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 253.4
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 252.7
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 250.6
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 250.5
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 248.2
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 247.1
GTEX-WQUQ-1926-SM-4M9QM 60-69 years, male 246.8
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 244.3
GTEX-X261-1726-SM-4PQYT 50-59 years, male 242.2
GTEX-15UF7-0426-SM-HAV2G 40-49 years, male 236.4
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 234.7
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 230.5
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 230.4
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 230.1
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 227.8
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 227.7
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 227.5
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 225.4
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 224.6
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 224.1
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 220.9
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 219.7
GTEX-QEL4-1226-SM-447A4 50-59 years, male 216.3
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 216.3
GTEX-1H23P-1826-SM-GA91S 60-69 years, male 213.9
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 208.3
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 207.7
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 206.5
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 201.4
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 200.8
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 198.9
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 198.8
GTEX-14PJO-1726-SM-68719 60-69 years, male 198.7
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 188.4
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 188.1
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 180.1
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 179.6
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 177.3
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 175.8
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 174.9
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 171.5
GTEX-13OVJ-1026-SM-5IFGI 50-59 years, female 170.3
GTEX-1J1OQ-0826-SM-CXZJG 40-49 years, female 166.1
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 165.7
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 160.9
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 158.4
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 155.3
GTEX-S32W-1926-SM-4AD63 50-59 years, female 144.1
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 143.1
GTEX-O5YV-0726-SM-EV798 60-69 years, female 129.3
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 127.4
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 108.4
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 106.7
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 96.5
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 95.7
GTEX-14XAO-0226-SM-68728 60-69 years, female 78.0
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 62.7
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

310.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 310.7
FF:10018-101C9 64,69,70 years, mixed 310.7

LIVER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

283.9
Pig sample Sample description nTPM
Liver
nTPM: 283.9
Samples: 4

Max nTPM: 338.5
Min nTPM: 242.7
Sample A Female 338.5
Sample B Female 242.7
Sample C Male 288.7
Sample D Male 265.6

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