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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

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  • EVOLUTION

  • PDCD5
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:40.9 nTPM
GTEx:122.9 nTPM
FANTOM5:122.0 Scaled Tags Per Million
Macaque:46.2 nTPM
Pig:126.2 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.9
Sample id Sample description nTPM
Putamen
nTPM: 40.9
2482 Female, age 94, left hemisphere 46.6
1838 Male, age 80, right hemisphere 45.4
1937 Female, age 91, right hemisphere 43.7
1829 Male, age 74, unknown 42.6
2466 Female, age 79, unknown 40.8
2489 Female, age 72, unknown 34.7
2647 Male, age 75, left hemisphere 32.7

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 122.9
Samples: 254

Max nTPM: 238.2
Min nTPM: 69.3
Std nTPM: 27.4
Median nTPM: 118.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 238.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 234.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 232.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 202.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 199.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 189.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 184.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 184.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 178.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 177.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 175.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 175.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 174.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 174.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 170.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 169.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 167.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 165.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 164.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 160.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 160.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 160.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 160.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 159.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 158.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 158.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 157.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 155.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 155.5
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 155.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 155.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 155.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 154.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 154.8
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 154.1
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 151.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 151.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 149.5
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 148.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 147.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 147.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 145.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 145.9
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 144.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 144.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 144.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 143.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 143.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 143.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 142.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 142.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 141.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 141.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 140.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 140.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 138.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 138.3
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 138.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 138.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 137.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 137.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 137.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 136.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 136.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 136.4
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 135.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 135.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 135.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 134.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 133.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 133.4
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 133.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 133.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 132.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 132.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 132.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 132.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 132.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 132.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 131.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 131.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 131.0
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 130.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 130.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 130.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 130.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 129.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 129.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 128.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 128.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 128.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 128.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 128.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 128.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 128.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 128.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 127.2
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 126.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 125.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 125.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 125.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 125.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 124.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 124.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 124.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 124.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 123.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 123.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 123.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 123.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 122.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 122.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 122.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 122.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 122.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 121.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 121.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 121.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 121.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 121.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 120.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 120.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 119.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 119.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 119.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 119.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 118.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 118.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 118.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 118.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 118.2
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 118.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 117.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 117.5
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 117.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 117.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 117.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 116.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 116.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 116.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 116.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 116.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 116.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 115.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 115.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 115.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 115.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 114.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 114.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 114.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 113.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 113.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 113.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 112.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 112.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 111.5
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 111.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 110.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 110.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 110.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 109.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 109.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 109.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 108.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 108.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 108.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 108.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 108.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 107.7
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 107.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 107.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 107.1
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 107.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 106.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 106.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 106.7
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 106.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 106.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 106.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 105.7
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 105.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 105.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 105.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 105.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 105.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 105.0
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 104.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 104.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 104.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 103.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 103.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 103.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 103.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 102.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 102.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 102.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 102.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 102.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 101.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 101.6
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 101.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 101.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 101.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 100.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 100.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 100.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 100.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 99.9
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 99.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 99.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 99.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 98.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 98.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 98.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 97.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 97.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 97.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 97.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 97.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 96.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 96.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 96.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 95.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 95.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 94.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 94.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 94.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 93.9
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 93.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 93.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 92.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 92.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 92.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 92.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 92.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 91.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 91.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 89.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 88.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 88.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 87.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 87.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 86.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 86.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 84.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 84.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 82.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 81.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 81.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 79.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 77.8
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 74.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 71.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 69.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

122.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 122.0
FF:10176-103C5 60 years, female 122.0

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.2
Macaque sample Sample description nTPM
Putamen
nTPM: 46.2
Samples: 2

Max nTPM: 60.9
Min nTPM: 31.4
Sample A 31.4
Sample B 60.9

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.2
Pig sample Sample description nTPM
Putamen
nTPM: 126.2
Samples: 3

Max nTPM: 155.8
Min nTPM: 93.9
Sample B Female 93.9
Sample C Male 155.8
Sample D Male 128.9

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