HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:135.7 nTPM
HPA Brain:310.1 nTPM
GTEx:135.7 nTPM
FANTOM5:322.2 Scaled Tags Per Million
Pig:230.2 nTPM
Mouse:327.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA079430
Glial cells High
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 310.1
Sample id Sample description nTPM
Hippocampus
nTPM: 245.6
2621 Female, age 67, right hemisphere 293.3
1855 Male, age 76, left hemisphere 292.8
1898 Male, age 80, left hemisphere 260.7
2529 Female, age 94, left hemisphere 218.0
2148 Female, age 91, left hemisphere 213.4
1911 Female, age 85, right hemisphere 195.1
Dentate gyrus
nTPM: 241.5
2530 Female, age 94, left hemisphere 301.4
2010 Male, age 76, both hemispheres 261.4
2246 Female, age 85, both hemispheres 250.4
1927 Female, age 91, both hemispheres 237.7
2531 Female, age 67, both hemispheres 216.8
2528 Male, age 74, both hemispheres 181.4
Entorhinal gyrus
nTPM: 301.1
2613 Female, age 94, left hemisphere 412.0
2764 Male, age 80, right hemisphere 332.9
1938 Female, age 85, left hemisphere 291.9
2686 Male, age 75, right hemisphere 283.5
1787 Male, age 76, left hemisphere 271.0
2117 Female, age 91, right hemisphere 215.7
Hippocampus, CA1
nTPM: 250.0
2749 Male, age 80, left hemisphere 349.1
1873 Female, age 85, both hemispheres 246.7
2045 Male, age 76, both hemispheres 235.4
2527 Male, age 74, both hemispheres 212.2
2082 Female, age 91, right hemisphere 206.8
Hippocampus, CA2
nTPM: 244.6
1892 Male, age 76, both hemispheres 347.8
2437 Female, age 94, left hemisphere 272.0
1963 Male, age 80, left hemisphere 257.2
1940 Female, age 85, left hemisphere 217.8
2113 Female, age 91, right hemisphere 206.2
2249 Male, age 74, both hemispheres 166.5
Hippocampus, CA3
nTPM: 242.0
2861 Female, age 67, both hemispheres 285.3
2137 Male, age 80, left hemisphere 283.6
2620 Female, age 94, left hemisphere 264.7
1867 Male, age 76, both hemispheres 254.6
1891 Female, age 85, both hemispheres 195.2
2436 Male, age 74, both hemispheres 168.7
Parahippocampal cortex
nTPM: 293.7
2245 Female, age 91, both hemispheres 359.2
2532 Female, age 72, left hemisphere 343.8
1850 Male, age 80, both hemispheres 324.9
2622 Female, age 67, right hemisphere 316.1
2693 Female, age 94, both hemispheres 286.1
1933 Female, age 85, both hemispheres 277.4
1990 Female, age 91, right hemisphere 275.4
2692 Male, age 74, both hemispheres 265.2
2250 Female, age 67, right hemisphere 258.7
2018 Male, age 76, both hemispheres 229.7
Perirhinal gyrus
nTPM: 310.1
1847 Female, age 91, left hemisphere 346.2
1794 Male, age 80, right hemisphere 330.9
2521 Female, age 94, right hemisphere 315.3
1841 Female, age 85, right hemisphere 281.3
2848 Male, age 76, right hemisphere 276.8
Subiculum
nTPM: 228.1
2619 Male, age 74, both hemispheres 269.2
1977 Female, age 85, both hemispheres 264.0
1901 Male, age 80, both hemispheres 249.7
2438 Female, age 94, left hemisphere 218.2
2042 Male, age 76, both hemispheres 214.5
2729 Female, age 91, right hemisphere 153.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 135.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 135.7
Samples: 255

Max nTPM: 272.8
Min nTPM: 40.5
Std nTPM: 47.0
Median nTPM: 133.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 272.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 258.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 257.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 250.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 239.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 239.2
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 239.0
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 238.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 235.6
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 232.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 221.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 322.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 322.2
FF:10153-102I9 76 years, female 349.5
FF:10169-103B7 60 years, female 294.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 230.2
Pig sample Sample description nTPM
Subiculum
nTPM: 223.7
Samples: 4

Max nTPM: 290.9
Min nTPM: 188.3
Sample A Female 290.9
Sample B Female 198.4
Sample C Male 217.1
Sample D Male 188.3
Dorsal hippocampus
nTPM: 230.1
Samples: 4

Max nTPM: 270.6
Min nTPM: 182.9
Sample A Female 270.6
Sample B Female 226.8
Sample C Male 239.9
Sample D Male 182.9
Entorhinal cortex
nTPM: 207.7
Samples: 4

Max nTPM: 231.1
Min nTPM: 186.5
Sample A Female 231.1
Sample B Female 186.5
Sample C Male 199.8
Sample D Male 213.5
Ventral hippocampus
nTPM: 230.3
Samples: 4

Max nTPM: 300.1
Min nTPM: 154.4
Sample A Female 211.3
Sample B Female 154.4
Sample C Male 300.1
Sample D Male 255.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 327.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 327.8
Samples: 4

Max nTPM: 398.6
Min nTPM: 297.1
Sample A Male 314.3
Sample B Male 301.3
Sample C Female 297.1
Sample D Female 398.6
Hippocampal formation
nTPM: 311.1
Samples: 4

Max nTPM: 342.6
Min nTPM: 261.2
Sample A Male 261.2
Sample B Male 333.9
Sample C Female 342.6
Sample D Female 306.5

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