HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:447.9 nTPM
HPA Brain:585.8 nTPM
GTEx:447.9 nTPM
FANTOM5:168.0 Scaled Tags Per Million
Pig:591.7 nTPM
Mouse:871.8 nTPM
Allen mouse:32.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028970Antibody HPA028971
Glial cells LowMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 585.8
Sample id Sample description nTPM
Hippocampus
nTPM: 467.5
1898 Male, age 80, left hemisphere 505.8
1911 Female, age 85, right hemisphere 500.7
2621 Female, age 67, right hemisphere 495.5
1855 Male, age 76, left hemisphere 489.7
2529 Female, age 94, left hemisphere 458.0
2148 Female, age 91, left hemisphere 355.0
Dentate gyrus
nTPM: 542.8
2530 Female, age 94, left hemisphere 881.5
2010 Male, age 76, both hemispheres 594.1
2246 Female, age 85, both hemispheres 460.0
2531 Female, age 67, both hemispheres 458.8
2528 Male, age 74, both hemispheres 448.1
1927 Female, age 91, both hemispheres 414.1
Entorhinal gyrus
nTPM: 576.1
2117 Female, age 91, right hemisphere 726.3
2764 Male, age 80, right hemisphere 709.7
2613 Female, age 94, left hemisphere 624.0
1938 Female, age 85, left hemisphere 529.2
1787 Male, age 76, left hemisphere 507.9
2686 Male, age 75, right hemisphere 359.2
Hippocampus, CA1
nTPM: 491.6
2749 Male, age 80, left hemisphere 604.5
2045 Male, age 76, both hemispheres 532.7
1873 Female, age 85, both hemispheres 492.2
2527 Male, age 74, both hemispheres 436.4
2082 Female, age 91, right hemisphere 392.4
Hippocampus, CA2
nTPM: 515.3
1963 Male, age 80, left hemisphere 599.8
2249 Male, age 74, both hemispheres 562.7
2437 Female, age 94, left hemisphere 521.8
1940 Female, age 85, left hemisphere 512.1
1892 Male, age 76, both hemispheres 498.7
2113 Female, age 91, right hemisphere 396.8
Hippocampus, CA3
nTPM: 445.0
2620 Female, age 94, left hemisphere 566.5
1891 Female, age 85, both hemispheres 555.2
1867 Male, age 76, both hemispheres 490.1
2137 Male, age 80, left hemisphere 480.0
2436 Male, age 74, both hemispheres 327.1
2861 Female, age 67, both hemispheres 251.5
Parahippocampal cortex
nTPM: 430.0
2532 Female, age 72, left hemisphere 553.6
1990 Female, age 91, right hemisphere 526.0
1850 Male, age 80, both hemispheres 508.2
1933 Female, age 85, both hemispheres 486.8
2018 Male, age 76, both hemispheres 459.9
2245 Female, age 91, both hemispheres 443.5
2692 Male, age 74, both hemispheres 432.7
2693 Female, age 94, both hemispheres 386.5
2250 Female, age 67, right hemisphere 311.5
2622 Female, age 67, right hemisphere 191.7
Perirhinal gyrus
nTPM: 492.4
1794 Male, age 80, right hemisphere 565.7
2521 Female, age 94, right hemisphere 502.9
2848 Male, age 76, right hemisphere 481.4
1841 Female, age 85, right hemisphere 465.1
1847 Female, age 91, left hemisphere 446.9
Subiculum
nTPM: 585.8
2042 Male, age 76, both hemispheres 825.0
1901 Male, age 80, both hemispheres 703.5
1977 Female, age 85, both hemispheres 683.3
2438 Female, age 94, left hemisphere 492.8
2619 Male, age 74, both hemispheres 425.6
2729 Female, age 91, right hemisphere 384.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 447.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 447.9
Samples: 255

Max nTPM: 2270.2
Min nTPM: 138.0
Std nTPM: 217.4
Median nTPM: 403.3
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2270.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1537.9
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 1130.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1070.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 1020.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 968.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 911.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 890.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 833.0
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 832.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 815.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 168.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 168.0
FF:10169-103B7 60 years, female 169.2
FF:10153-102I9 76 years, female 166.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 591.7
Pig sample Sample description nTPM
Subiculum
nTPM: 353.7
Samples: 4

Max nTPM: 439.8
Min nTPM: 309.6
Sample A Female 439.8
Sample B Female 340.5
Sample C Male 324.8
Sample D Male 309.6
Dorsal hippocampus
nTPM: 591.7
Samples: 4

Max nTPM: 819.6
Min nTPM: 353.6
Sample A Female 819.6
Sample B Female 560.1
Sample C Male 633.3
Sample D Male 353.6
Entorhinal cortex
nTPM: 367.0
Samples: 4

Max nTPM: 416.7
Min nTPM: 336.0
Sample A Female 416.7
Sample B Female 364.2
Sample C Male 351.2
Sample D Male 336.0
Ventral hippocampus
nTPM: 461.5
Samples: 4

Max nTPM: 623.2
Min nTPM: 262.1
Sample A Female 475.3
Sample B Female 262.1
Sample C Male 485.2
Sample D Male 623.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 871.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 807.1
Samples: 4

Max nTPM: 914.5
Min nTPM: 739.9
Sample A Male 811.1
Sample B Male 763.0
Sample C Female 739.9
Sample D Female 914.5
Hippocampal formation
nTPM: 871.9
Samples: 4

Max nTPM: 1016.0
Min nTPM: 765.0
Sample A Male 765.0
Sample B Male 867.2
Sample C Female 1016.0
Sample D Female 839.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 32.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 32.8
69015613 Antisense, RP_050315_01_C12, Mouse strain C57BL/6J (56 days, male) 32.8

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo