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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPS19
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN40 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM8 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE13 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL SPINAL CORD ENTORHINAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:478.9 nTPM
GTEx:1230.1 nTPM
FANTOM5:16.7 Scaled Tags Per Million
Pig:554.0 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

478.9
Sample id Sample description nTPM
Putamen
nTPM: 478.9
2466 Female, age 79, unknown 565.3
1937 Female, age 91, right hemisphere 506.3
2489 Female, age 72, unknown 496.1
2482 Female, age 94, left hemisphere 486.2
2647 Male, age 75, left hemisphere 477.2
1838 Male, age 80, right hemisphere 430.1
1829 Male, age 74, unknown 391.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1230.1
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1230.1
Samples: 254

Max nTPM: 2914.1
Min nTPM: 481.7
Std nTPM: 403.3
Median nTPM: 1151.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2914.1
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 2786.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2706.6
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 2575.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2460.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 2354.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 2271.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2263.4
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 2239.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 2238.7
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 2135.9
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 2000.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1972.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1941.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1940.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1925.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1899.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1887.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1874.8
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1861.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1850.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1814.1
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1802.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1772.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1754.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1719.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1718.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1705.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1702.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1699.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1699.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1689.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1670.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1658.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1655.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1652.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1650.7
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1613.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1609.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1603.8
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1580.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1571.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1551.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1549.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1538.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1524.8
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1516.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1508.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 1504.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1494.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1489.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1485.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1481.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1469.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1466.8
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1457.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1456.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1448.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1442.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1415.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1411.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1403.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1402.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1399.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1399.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1398.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1380.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1378.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1376.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1367.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1366.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1357.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1355.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1332.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1330.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1328.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1326.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1324.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1322.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1318.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1317.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1311.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1310.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1309.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1300.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1289.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1288.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1285.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1284.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 1282.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1281.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1281.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1272.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1269.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1268.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1257.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1254.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1246.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1244.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1243.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1240.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 1240.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1230.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1223.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1223.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1222.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1222.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1212.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1210.2
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 1206.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1201.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1194.8
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1192.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1190.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1189.8
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 1188.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1187.2
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1186.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1181.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1176.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1175.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 1171.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 1171.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1166.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1160.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1159.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1152.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1150.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1148.7
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 1141.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 1139.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1138.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1138.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1137.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1136.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 1135.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1122.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1120.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1118.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1115.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1114.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 1112.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1111.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1110.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1107.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1103.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1096.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 1096.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1091.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 1090.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1085.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1085.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1084.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1076.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1058.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1058.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1054.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1045.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1043.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1043.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 1042.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1038.5
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 1035.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1031.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1029.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1023.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1011.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 1009.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1006.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1003.8
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 1002.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 1001.7
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 1001.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1000.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 995.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 995.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 990.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 989.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 986.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 986.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 985.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 984.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 975.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 971.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 969.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 969.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 959.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 959.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 955.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 954.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 953.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 948.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 943.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 942.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 935.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 935.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 934.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 932.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 928.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 926.6
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 922.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 919.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 916.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 912.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 906.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 905.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 901.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 897.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 896.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 895.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 894.9
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 887.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 885.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 882.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 878.1
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 874.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 857.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 856.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 850.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 847.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 845.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 840.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 839.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 839.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 837.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 835.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 834.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 831.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 822.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 821.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 817.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 816.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 815.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 809.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 792.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 779.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 770.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 769.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 764.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 762.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 753.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 733.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 721.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 716.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 713.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 707.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 704.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 702.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 684.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 675.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 647.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 558.5
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 540.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 481.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

16.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 16.7
FF:10176-103C5 60 years, female 16.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

554.0
Pig sample Sample description nTPM
Putamen
nTPM: 554.0
Samples: 3

Max nTPM: 649.5
Min nTPM: 459.5
Sample B Female 459.5
Sample C Male 649.5
Sample D Male 553.0

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