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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • WDR83OS
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN40 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM8 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE13 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL SPINAL CORD ENTORHINAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:65.5 nTPM
GTEx:161.6 nTPM
FANTOM5:76.7 Scaled Tags Per Million
Pig:72.6 nTPM

PUTAMEN - Annotated protein expression
Pending normal tissue analysis

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.5
Sample id Sample description nTPM
Putamen
nTPM: 65.5
2482 Female, age 94, left hemisphere 77.4
2466 Female, age 79, unknown 77.0
1838 Male, age 80, right hemisphere 70.1
1937 Female, age 91, right hemisphere 70.0
1829 Male, age 74, unknown 61.6
2647 Male, age 75, left hemisphere 55.3
2489 Female, age 72, unknown 47.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 161.6
Samples: 254

Max nTPM: 298.7
Min nTPM: 102.2
Std nTPM: 29.2
Median nTPM: 158.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 298.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 273.5
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 246.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 237.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 232.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 228.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 228.3
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 226.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 226.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 224.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 224.1
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 223.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 219.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 217.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 213.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 207.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 206.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 205.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 205.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 205.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 204.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 204.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 202.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 202.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 200.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 199.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 197.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 196.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 194.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 194.3
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 191.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 191.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 191.0
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 190.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 189.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 188.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 188.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 187.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 186.2
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 186.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 185.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 184.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 184.6
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 184.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 184.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 183.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 182.6
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 182.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 181.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 181.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 181.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 180.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 180.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 180.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 179.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 179.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 179.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 179.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 178.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 178.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 178.1
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 177.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 177.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 177.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 177.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 175.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 175.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 175.2
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 175.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 175.0
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 174.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 174.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 174.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 174.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 173.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 173.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 173.2
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 172.5
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 171.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 171.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 171.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 171.5
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 171.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 170.9
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 170.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 170.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 170.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 170.0
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 169.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 169.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 168.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 167.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 167.2
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 167.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 167.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 166.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 166.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 166.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 166.4
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 166.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 166.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 166.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 166.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 165.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 165.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 165.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 164.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 164.3
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 164.1
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 163.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 163.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 163.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 163.2
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 163.1
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 162.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 162.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 162.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 161.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 161.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 161.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 160.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 160.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 160.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 159.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 159.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 159.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 158.8
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 158.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 158.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 158.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 157.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 157.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 157.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 157.6
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 157.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 157.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 156.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 155.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 155.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 155.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 155.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 154.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 154.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 154.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 154.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 153.7
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 153.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 153.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 153.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 153.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 152.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 152.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 152.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 152.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 151.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 151.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 150.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 150.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 150.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 150.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 150.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 150.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 149.7
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 149.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 148.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 148.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 147.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 147.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 147.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 146.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 146.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 146.1
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 145.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 145.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 145.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 145.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 145.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 145.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 145.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 145.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 145.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 144.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 144.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 144.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 144.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 143.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 143.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 143.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 142.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 142.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 142.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 141.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 141.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 140.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 140.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 140.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 139.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 139.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 139.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 139.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 138.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 137.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 136.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 136.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 136.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 135.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 135.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 134.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 134.2
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 134.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 134.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 133.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 133.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 133.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 133.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 133.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 133.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 133.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 132.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 132.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 131.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 131.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 130.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 129.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 129.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 129.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 128.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 128.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 127.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 127.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 126.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 126.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 126.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 123.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 122.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 122.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 122.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 122.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 122.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 122.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 121.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 121.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 120.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 117.9
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 117.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 117.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 115.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 114.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 112.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 111.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 111.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 110.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 105.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 102.2
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

76.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 76.7
FF:10176-103C5 60 years, female 76.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.6
Pig sample Sample description nTPM
Putamen
nTPM: 72.6
Samples: 3

Max nTPM: 91.8
Min nTPM: 59.1
Sample B Female 59.1
Sample C Male 91.8
Sample D Male 66.8

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