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  • SCN1B
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:38.9 nTPM
HPA Brain:208.6 nTPM
GTEx:38.9 nTPM
Pig:14.0 nTPM
Mouse:101.3 nTPM
Allen mouse:14.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

208.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 35.0
2226 Male, age 75, left hemisphere 48.1
1961 Female, age 42, unknown 22.0
Dorsomedial nucleus
nTPM: 74.0
1989 Male, age 62, unknown 176.0
2017 Female, age 42, unknown 26.3
2041 Female, age 72, unknown 19.8
Lateral hypothalamic area
nTPM: 45.9
2228 Male, age 66, unknown 60.1
2271 Male, age 75, both hemispheres 57.3
1791 Male, age 80, right hemisphere 39.9
2412 Male, age 62, unknown 26.3
Mammillary body
nTPM: 208.6
1923 Female, age 72, unknown 338.9
2413 Male, age 66, unknown 226.7
1834 Female, age 42, unknown 197.5
1948 Female, age 72, unknown 184.2
1945 Male, age 80, right hemisphere 95.5
Paraventricular nucleus
nTPM: 25.7
2700 Male, age 62, unknown 25.7
Preoptic area
nTPM: 30.7
1861 Female, age 42, unknown 35.3
2414 Female, age 72, unknown 32.7
1907 Male, age 80, right hemisphere 24.1
Supraoptic nucleus
nTPM: 22.8
2835 Female, age 72, unknown 34.8
1894 Female, age 72, unknown 19.5
2043 Male, age 62, unknown 14.0
Ventromedial nucleus
nTPM: 23.6
1982 Female, age 72, unknown 28.8
1822 Female, age 42, unknown 18.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 38.9
Samples: 257

Max nTPM: 422.3
Min nTPM: 8.6
Std nTPM: 45.0
Median nTPM: 25.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 422.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 361.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 235.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 214.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 180.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 172.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 165.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 153.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 147.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 140.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 137.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 131.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 102.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 102.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 101.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 100.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 88.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 83.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 82.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 80.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 80.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 77.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 77.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 74.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 72.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 70.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 70.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 67.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 65.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 62.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 60.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 59.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 59.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 59.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 58.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 57.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 56.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 56.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 54.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 53.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 52.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 52.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 49.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 48.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 48.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 47.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 46.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 46.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 46.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 45.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 44.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 44.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 42.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 41.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 41.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 40.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 40.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 40.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 40.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 39.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 38.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 37.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 36.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 36.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 36.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 36.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 35.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 35.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 34.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 34.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 34.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 34.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 34.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 33.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 33.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 33.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 33.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 32.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 32.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 32.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 32.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 32.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 31.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 31.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 31.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 31.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 31.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 31.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 30.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 30.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 30.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 30.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 29.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 29.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 29.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 29.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 29.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 29.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 29.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 28.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 28.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 28.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 28.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 27.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 27.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 27.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 27.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 27.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 27.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 27.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 27.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 26.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 26.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 26.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 26.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 26.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 26.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 26.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 26.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 26.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 26.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 26.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 26.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 25.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 25.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 25.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 25.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 25.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 25.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 25.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 25.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 25.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 24.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 24.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 24.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 24.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 24.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 24.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 24.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 24.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 24.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 24.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 24.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 24.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 23.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 23.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 23.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 23.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 23.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 23.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 23.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 23.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 23.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 23.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 23.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 23.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 22.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 22.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 22.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 22.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 22.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 22.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 22.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 22.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 22.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 22.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 22.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 22.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 22.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 22.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 22.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 21.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 21.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 21.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 21.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 21.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 21.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 21.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 21.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 21.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 21.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 21.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 21.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 21.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 20.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 20.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 20.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 20.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 20.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 20.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 20.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 20.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 20.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 20.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 20.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 20.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 20.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 20.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 20.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 19.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 19.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 19.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 19.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 19.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 19.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 19.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 19.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 19.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 18.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 18.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 18.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 18.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 18.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 18.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 18.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 18.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 18.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 18.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 17.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 17.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 17.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 17.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 17.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 17.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 17.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 17.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 17.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 17.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 17.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 16.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 16.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 16.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 16.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 16.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 16.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 16.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 15.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 15.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 15.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 15.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 15.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 15.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 15.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 14.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 14.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 14.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 14.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 14.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 13.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 13.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 12.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 11.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 11.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 11.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 10.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 10.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 8.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 14.0
Samples: 4

Max nTPM: 18.5
Min nTPM: 8.6
Sample A Female 16.1
Sample B Female 18.5
Sample C Male 12.6
Sample D Male 8.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 101.3
Samples: 4

Max nTPM: 113.0
Min nTPM: 89.1
Sample A Male 111.5
Sample B Male 113.0
Sample C Female 89.1
Sample D Female 91.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 14.1
77454673 Antisense, RP_070129_01_C06, Mouse strain C57BL/6J (56 days, male) 14.1

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