HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:123.8 nTPM
HPA Brain:108.1 nTPM
GTEx:123.8 nTPM
FANTOM5:55.5 Scaled Tags Per Million
Pig:147.4 nTPM
Mouse:87.2 nTPM
Allen mouse:8.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007033Antibody HPA012049
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 108.1
Sample id Sample description nTPM
Hippocampus
nTPM: 108.1
1898 Male, age 80, left hemisphere 129.1
2621 Female, age 67, right hemisphere 125.4
1855 Male, age 76, left hemisphere 116.5
2148 Female, age 91, left hemisphere 100.2
2529 Female, age 94, left hemisphere 90.2
1911 Female, age 85, right hemisphere 87.0
Dentate gyrus
nTPM: 91.3
2010 Male, age 76, both hemispheres 119.3
1927 Female, age 91, both hemispheres 107.7
2531 Female, age 67, both hemispheres 89.2
2530 Female, age 94, left hemisphere 87.8
2528 Male, age 74, both hemispheres 81.1
2246 Female, age 85, both hemispheres 62.5
Entorhinal gyrus
nTPM: 105.8
2613 Female, age 94, left hemisphere 153.9
2764 Male, age 80, right hemisphere 115.7
1938 Female, age 85, left hemisphere 97.2
1787 Male, age 76, left hemisphere 96.2
2686 Male, age 75, right hemisphere 89.9
2117 Female, age 91, right hemisphere 81.9
Hippocampus, CA1
nTPM: 95.0
2749 Male, age 80, left hemisphere 129.7
2045 Male, age 76, both hemispheres 106.3
1873 Female, age 85, both hemispheres 89.6
2527 Male, age 74, both hemispheres 78.0
2082 Female, age 91, right hemisphere 71.4
Hippocampus, CA2
nTPM: 98.9
1963 Male, age 80, left hemisphere 153.7
1892 Male, age 76, both hemispheres 121.3
2437 Female, age 94, left hemisphere 104.0
1940 Female, age 85, left hemisphere 84.2
2113 Female, age 91, right hemisphere 70.6
2249 Male, age 74, both hemispheres 59.6
Hippocampus, CA3
nTPM: 101.4
2861 Female, age 67, both hemispheres 140.8
1867 Male, age 76, both hemispheres 115.2
2620 Female, age 94, left hemisphere 113.0
2137 Male, age 80, left hemisphere 100.0
1891 Female, age 85, both hemispheres 87.2
2436 Male, age 74, both hemispheres 52.0
Parahippocampal cortex
nTPM: 88.8
2018 Male, age 76, both hemispheres 111.4
2693 Female, age 94, both hemispheres 105.1
1850 Male, age 80, both hemispheres 95.9
2622 Female, age 67, right hemisphere 93.7
2692 Male, age 74, both hemispheres 89.3
1933 Female, age 85, both hemispheres 88.1
2245 Female, age 91, both hemispheres 85.6
2532 Female, age 72, left hemisphere 82.1
1990 Female, age 91, right hemisphere 75.9
2250 Female, age 67, right hemisphere 61.2
Perirhinal gyrus
nTPM: 104.3
2521 Female, age 94, right hemisphere 131.6
1847 Female, age 91, left hemisphere 113.4
1794 Male, age 80, right hemisphere 109.7
1841 Female, age 85, right hemisphere 94.2
2848 Male, age 76, right hemisphere 72.8
Subiculum
nTPM: 88.8
2042 Male, age 76, both hemispheres 108.0
1901 Male, age 80, both hemispheres 102.1
2619 Male, age 74, both hemispheres 91.1
1977 Female, age 85, both hemispheres 90.3
2729 Female, age 91, right hemisphere 77.9
2438 Female, age 94, left hemisphere 63.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 123.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 123.8
Samples: 255

Max nTPM: 299.3
Min nTPM: 22.4
Std nTPM: 45.0
Median nTPM: 120.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 299.3
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 288.1
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 280.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 252.8
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 235.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 231.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 219.2
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 219.1
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 218.4
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 217.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 216.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 55.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.5
FF:10169-103B7 60 years, female 60.2
FF:10153-102I9 76 years, female 50.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 147.4
Pig sample Sample description nTPM
Subiculum
nTPM: 117.1
Samples: 4

Max nTPM: 165.3
Min nTPM: 88.5
Sample A Female 165.3
Sample B Female 105.6
Sample C Male 109.0
Sample D Male 88.5
Dorsal hippocampus
nTPM: 133.5
Samples: 4

Max nTPM: 170.4
Min nTPM: 97.7
Sample A Female 170.4
Sample B Female 138.6
Sample C Male 127.2
Sample D Male 97.7
Entorhinal cortex
nTPM: 147.4
Samples: 4

Max nTPM: 174.5
Min nTPM: 123.2
Sample A Female 157.7
Sample B Female 134.1
Sample C Male 174.5
Sample D Male 123.2
Ventral hippocampus
nTPM: 125.9
Samples: 4

Max nTPM: 164.9
Min nTPM: 88.7
Sample A Female 106.6
Sample B Female 88.7
Sample C Male 143.3
Sample D Male 164.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 87.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 87.2
Samples: 4

Max nTPM: 94.5
Min nTPM: 79.6
Sample A Male 92.8
Sample B Male 94.5
Sample C Female 81.9
Sample D Female 79.6
Hippocampal formation
nTPM: 62.8
Samples: 4

Max nTPM: 65.5
Min nTPM: 56.2
Sample A Male 64.4
Sample B Male 56.2
Sample C Female 65.1
Sample D Female 65.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
74658055 Antisense, RP_060220_04_C10, Mouse strain C57BL/6J (56 days, male) 9.8
69548819 Antisense, RP_050426_02_D04, Mouse strain C57BL/6J (56 days, male) 6.6

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