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BETA
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  • RARRES2
EVOLUTIONARY VAGINA Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Breast & female reproductive system
Evolutionary methods
VAGINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:423.1 nTPM
GTEx:423.1 nTPM
FANTOM5:154.1 Scaled Tags Per Million
Macaque:163.8 nTPM
Mouse:18.1 nTPM
Rat:38.9 nTPM

VAGINA - Annotated protein expression
Pending normal tissue analysis

VAGINA - PROTEINTALKS DB MS
Median intensity 4474
Sample Intensity
Vagina_01
4474

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

423.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 423.1
Samples: 170

Max nTPM: 1554.4
Min nTPM: 41.0
Std nTPM: 280.3
Median nTPM: 349.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1554.4
GTEX-WYBS-2826-SM-GOQYI 60-69 years, female 1423.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1179.8
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1171.2
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 1104.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1087.1
GTEX-OXRK-2026-SM-GOQY5 50-59 years, female 1012.9
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 1002.3
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 922.7
GTEX-O5YV-2226-SM-HM8V7 60-69 years, female 896.2
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 884.8
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 871.6
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 864.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 864.6
GTEX-R45C-2226-SM-GQ1EF 60-69 years, female 848.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 837.8
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 823.6
GTEX-WI4N-2626-SM-GPI8F 40-49 years, female 814.1
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 791.0
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 759.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 754.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 732.8
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 731.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 730.0
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 715.5
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 714.0
GTEX-ZVZQ-2726-SM-GPRY1 60-69 years, female 712.8
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 708.3
GTEX-13FTY-2026-SM-GIN9K 40-49 years, female 703.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 692.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 688.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 673.2
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 672.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 670.3
GTEX-RTLS-2126-SM-GPRWH 60-69 years, female 668.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 659.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 652.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 636.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 632.6
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 626.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 592.2
GTEX-RNOR-2526-SM-F21KT 50-59 years, female 589.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 581.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 575.2
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 575.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 565.8
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 551.5
GTEX-16MT8-2426-SM-GQ1DK 60-69 years, female 551.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 549.6
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 549.2
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 547.0
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 535.0
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 504.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 487.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 486.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 484.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 483.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 481.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 460.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 458.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 453.7
GTEX-W5X1-2226-SM-GRR1G 40-49 years, female 446.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 442.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 433.4
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 422.6
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 415.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 413.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 412.6
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 410.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 409.5
GTEX-147F3-1526-SM-5MR7L 50-59 years, female 407.7
GTEX-139D8-2626-SM-GJ3QN 30-39 years, female 394.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 386.1
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 382.8
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 378.9
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 364.5
GTEX-QCQG-1226-SM-48U23 50-59 years, female 364.5
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 361.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 361.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 360.9
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 359.2
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 357.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 356.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 355.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 351.7
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 348.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 341.4
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 338.0
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 335.5
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 334.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 333.6
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 333.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 331.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 330.3
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 328.9
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 323.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 321.8
GTEX-14A5I-2726-SM-5MR84 50-59 years, female 321.0
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 317.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 317.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 316.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 296.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 293.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 284.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 275.8
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 275.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 270.9
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 270.1
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 262.4
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 261.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 261.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 258.0
GTEX-1LKK1-1826-SM-GNIPA 50-59 years, female 256.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 249.7
GTEX-S4UY-1026-SM-4AD53 40-49 years, female 249.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 247.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 247.1
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 246.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 245.2
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 244.9
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 241.2
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 240.5
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 239.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 237.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 236.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 233.6
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 223.0
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 219.1
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 218.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 212.7
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 210.7
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 209.1
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 200.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 199.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 197.2
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 194.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 193.7
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 193.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 191.0
GTEX-ZAJG-2926-SM-5HL8P 50-59 years, female 188.8
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 180.0
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 178.8
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 173.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 168.9
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 161.4
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 160.6
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 157.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 151.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 149.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 145.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 141.7
GTEX-14PKU-1326-SM-6871B 40-49 years, female 140.1
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 138.2
GTEX-XYKS-2826-SM-H7OG8 60-69 years, female 135.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 128.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 125.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 119.7
GTEX-132AR-1626-SM-5EGHP 50-59 years, female 108.7
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 99.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 98.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 90.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 83.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 78.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 60.0
GTEX-1MA7W-1226-SM-HL9SB 20-29 years, female 58.0
GTEX-S341-1226-SM-4AD5S 40-49 years, female 57.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 49.9
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 45.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 44.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 41.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

154.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 154.1
FF:10204-103F6 68 years, female 154.1

VAGINA - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

163.8
Macaque sample Sample description nTPM
Vagina
nTPM: 163.8
Samples: 1

Max nTPM: 163.8
Min nTPM: 163.8
Sample A 163.8

VAGINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.1
Mouse sample Sample description nTPM
Vagina
nTPM: 18.1
Samples: 2

Max nTPM: 23.0
Min nTPM: 13.2
Sample A 13.2
Sample B 23.0

VAGINA - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.9
Rat sample Sample description nTPM
Vagina
nTPM: 39.0
Samples: 2

Max nTPM: 56.2
Min nTPM: 21.7
Sample A 21.7
Sample A 56.2

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