ENG
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • ENG
EVOLUTIONARY SPLEEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Bone marrow & Lymphoid tissues
Evolutionary methods
SPLEEN - Expression summary
Protein expression
Spleeni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in red pulp: Not detected
Cells in white pulp: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:219.0 nTPM
HPA:118.3 nTPM
GTEx:219.0 nTPM
FANTOM5:325.6 Scaled Tags Per Million
Macaque:62.2 nTPM
Mouse:33.6 nTPM
Rat:54.0 nTPM
Pig:58.1 nTPM
SPLEEN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPLEEN - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA011862Antibody HPA067440Antibody CAB000096Antibody CAB072873
Cells in red pulp Not detectedNot detectedNot detectedNot detected
Cells in white pulp Not detectedNot detectedNot detectedNot detected









SPLEEN - PROTEINTALKS DB MS
Median intensity 5084
Sample Intensity
Spleen_01
5084
Spleen_02
8035
Spleen_03
5009

SPLEEN - MANN MS
Median intensity 6529198
Replicate Intensity
Spleen_01
5173611
Spleen_02
6795016
Spleen_03
6529198

SPLEEN - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.3
overview
Female, age 60
Spleen sample 236
nTPM: 156.1
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
10

overview
Male, age 17
Spleen sample 237
nTPM: 149.1
Cell types%
Lymphocytes:
40

Macrophages:
35

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
5

overview
Male, age 20
Spleen sample 238
nTPM: 106.3
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
5

Other cell types:
10

overview
Female, age 19
Spleen sample 239
nTPM: 112.4
Cell types%
Lymphocytes:
40

Macrophages:
30

Endothelial cells:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 65
Spleen sample 378
nTPM: 67.5
Cell types%
Lymphocytes:
35

Macrophages:
30

Endothelial cells:
20

Fibroblasts:
10

Other cell types:
5


SPLEEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

219.0
GTEx sample id Sample description nTPM
Spleen
Average nTPM: 219.0
Samples: 277

Max nTPM: 636.5
Min nTPM: 78.2
Std nTPM: 91.6
Median nTPM: 195.2
GTEX-16MT9-1726-SM-6M47P 60-69 years, female 636.5
GTEX-1C6VQ-2126-SM-7IGNL 50-59 years, male 557.2
GTEX-14PJO-2026-SM-GOQYV 60-69 years, male 550.0
GTEX-O5YW-0926-SM-HK7A1 50-59 years, male 542.4
GTEX-1QMI2-1526-SM-EXOJT 60-69 years, male 524.9
GTEX-111FC-1326-SM-5N9D9 60-69 years, male 488.7
GTEX-1LNCM-0426-SM-DHXK6 50-59 years, female 464.9
GTEX-1H3O1-1126-SM-9WPO9 60-69 years, male 450.8
GTEX-1JMPZ-0926-SM-CXZJR 30-39 years, male 438.2
GTEX-1KD5A-1526-SM-D4P3W 50-59 years, male 436.9
GTEX-XV7Q-0126-SM-4BRVK 40-49 years, female 432.8
GTEX-1PIIG-1226-SM-EXOIQ 30-39 years, male 427.5
GTEX-15CHQ-1226-SM-6ETZL 60-69 years, male 415.8
GTEX-17F96-1426-SM-7IGQA 70-79 years, male 404.8
GTEX-15RIF-0526-SM-6LLI2 20-29 years, male 397.1
GTEX-1R9K4-1526-SM-DPRY5 60-69 years, male 397.1
GTEX-17F97-1626-SM-72D6W 50-59 years, male 396.9
GTEX-X585-1826-SM-4QAS3 50-59 years, male 391.5
GTEX-14BMU-0426-SM-5P9FI 20-29 years, female 381.9
GTEX-O5YT-0926-SM-48TDG 20-29 years, male 380.5
GTEX-18A7A-1626-SM-HAV37 50-59 years, female 365.8
GTEX-15ER7-1526-SM-6LLHO 20-29 years, female 363.5
GTEX-15RIE-1626-SM-HAUZ7 60-69 years, male 353.3
GTEX-17F98-0126-SM-7MGW3 40-49 years, female 351.3
GTEX-RUSQ-0126-SM-47JWV 50-59 years, male 348.6
GTEX-147F3-0126-SM-5NQBJ 50-59 years, female 343.1
GTEX-R55G-0226-SM-48FEI 40-49 years, female 339.3
GTEX-15G1A-0226-SM-H7OFT 30-39 years, male 333.5
GTEX-1JMQK-1126-SM-CXZJW 60-69 years, male 328.7
GTEX-P78B-1226-SM-EZ6KP 40-49 years, female 325.0
GTEX-ZTTD-1726-SM-57WEL 50-59 years, male 323.8
GTEX-P4QS-0926-SM-48TBS 60-69 years, male 319.0
GTEX-1LSNM-0126-SM-EAZ57 50-59 years, male 316.7
GTEX-12BJ1-0726-SM-5EGGF 60-69 years, male 315.5
GTEX-S4Q7-0126-SM-4AD5P 20-29 years, male 315.1
GTEX-12WSJ-0526-SM-5GCOZ 40-49 years, female 310.8
GTEX-14PJ4-0526-SM-6871G 60-69 years, male 310.1
GTEX-1S82Z-0126-SM-F2I21 30-39 years, female 309.3
GTEX-14PJ3-0326-SM-GPI94 50-59 years, male 306.2
GTEX-1S82P-1326-SM-HL9SA 60-69 years, female 304.8
GTEX-1B97I-0126-SM-731DH 40-49 years, male 303.7
GTEX-U4B1-0526-SM-4DXTK 40-49 years, male 301.5
GTEX-YB5K-1926-SM-4VDT4 40-49 years, female 300.3
GTEX-1MGNQ-1126-SM-EAZ4Y 40-49 years, male 295.0
GTEX-T5JW-0126-SM-4DM6K 20-29 years, female 293.9
GTEX-S3XE-0626-SM-4AD6B 50-59 years, male 291.0
GTEX-XPVG-0626-SM-4B65B 50-59 years, male 288.6
GTEX-1FIGZ-0126-SM-7MKGZ 40-49 years, male 284.6
GTEX-17HHE-0326-SM-793BH 50-59 years, male 284.3
GTEX-16MT8-1826-SM-7EWE8 60-69 years, female 283.5
GTEX-O5YV-0826-SM-HM8V9 60-69 years, female 283.5
GTEX-1JMLX-1426-SM-CNNPO 50-59 years, male 282.6
GTEX-15F5U-0126-SM-6LPKA 40-49 years, male 281.8
GTEX-QDVN-0526-SM-48TZ4 50-59 years, male 280.7
GTEX-12WSG-0926-SM-5EGIH 50-59 years, female 277.7
GTEX-W5X1-0326-SM-HAUYG 40-49 years, female 273.7
GTEX-131XG-0426-SM-5IFGD 50-59 years, female 271.8
GTEX-1OFPY-0126-SM-EXOJ3 60-69 years, male 271.3
GTEX-132QS-0226-SM-5IFFZ 60-69 years, male 270.9
GTEX-U3ZN-0126-SM-4DXUM 30-39 years, female 270.3
GTEX-16XZY-0126-SM-7IGQ9 70-79 years, male 269.5
GTEX-1IDJF-1526-SM-GA8ZR 20-29 years, male 267.9
GTEX-YB5E-0426-SM-5IFHR 40-49 years, male 266.4
GTEX-WHWD-0126-SM-4M9Q5 50-59 years, male 266.2
GTEX-11EQ9-0426-SM-5A5JY 30-39 years, male 265.6
GTEX-WFON-0126-SM-4LVM9 40-49 years, male 265.4
GTEX-18A67-1526-SM-7LG6F 50-59 years, male 264.2
GTEX-1R9JW-0126-SM-EAZ4P 30-39 years, female 262.0
GTEX-P4PP-0926-SM-48TBZ 30-39 years, female 261.9
GTEX-1MJK3-0126-SM-DPRYY 20-29 years, male 257.9
GTEX-1KANA-1226-SM-DHXKE 20-29 years, male 257.6
GTEX-POMQ-0126-SM-48TD6 20-29 years, female 256.4
GTEX-P4PQ-0926-SM-E9U4D 60-69 years, male 255.2
GTEX-1RNTQ-1026-SM-EV7B4 20-29 years, female 254.5
GTEX-ZF29-0626-SM-4WKHD 60-69 years, female 253.6
GTEX-QMRM-0226-SM-CL55S 50-59 years, male 252.7
GTEX-Y114-0726-SM-4TT6U 50-59 years, female 252.0
GTEX-OIZH-0926-SM-48TBR 50-59 years, male 250.0
GTEX-Q734-0226-SM-48U1A 40-49 years, female 248.8
GTEX-1N2DV-0726-SM-HK7AD 40-49 years, male 246.7
GTEX-QLQW-0126-SM-447BK 30-39 years, male 245.6
GTEX-S4Z8-0226-SM-4AD5K 60-69 years, male 244.0
GTEX-12WSD-1726-SM-5GCN4 60-69 years, female 243.8
GTEX-ZYFG-0726-SM-5GIDX 60-69 years, female 242.5
GTEX-1I1GT-0226-SM-GA8ZH 60-69 years, female 241.9
GTEX-1PPH7-0126-SM-E6CPB 40-49 years, male 241.2
GTEX-1LSVX-1426-SM-DHXJO 60-69 years, male 240.9
GTEX-15SDE-0126-SM-793BA 50-59 years, female 239.4
GTEX-1QAET-2326-SM-EXOJ1 50-59 years, male 237.9
GTEX-ZV6S-0826-SM-5NQ6Z 40-49 years, female 236.5
GTEX-1MCYP-0226-SM-EV7A3 20-29 years, female 235.5
GTEX-13111-0126-SM-5EGHO 50-59 years, male 234.8
GTEX-ZEX8-0726-SM-4WKH8 50-59 years, male 233.9
GTEX-ZVZP-0726-SM-59HKA 50-59 years, male 233.8
GTEX-1N2EF-1526-SM-EXOIY 60-69 years, male 233.5
GTEX-Y5V5-1126-SM-EVYAR 60-69 years, female 231.5
GTEX-1CB4E-0126-SM-7DHMX 60-69 years, male 231.3
GTEX-1211K-0426-SM-5FQTP 60-69 years, female 231.1
GTEX-UJHI-0126-SM-4IHLP 50-59 years, female 230.1
GTEX-13CF3-0226-SM-5J1NW 60-69 years, female 229.8
GTEX-ZPU1-1026-SM-4YCEQ 40-49 years, male 229.5
GTEX-X4LF-0226-SM-4QAS8 50-59 years, male 226.7
GTEX-1R9K5-1126-SM-EAZ4G 50-59 years, male 226.6
GTEX-1R7EU-2026-SM-E9U63 60-69 years, male 226.0
GTEX-111CU-0426-SM-5GZY1 50-59 years, male 225.0
GTEX-15UF7-1926-SM-6LPJT 40-49 years, male 225.0
GTEX-1NUQO-0426-SM-HK79G 20-29 years, female 224.4
GTEX-XMK1-0126-SM-4B65F 40-49 years, male 223.9
GTEX-YFCO-0926-SM-5LUA5 40-49 years, male 221.7
GTEX-11P81-1326-SM-5GU5S 30-39 years, female 219.7
GTEX-14E1K-0126-SM-664NL 50-59 years, male 219.5
GTEX-U3ZH-0126-SM-4DXUK 30-39 years, male 219.5
GTEX-WY7C-0126-SM-4ONCO 50-59 years, male 217.8
GTEX-14JG6-0226-SM-6872A 30-39 years, female 217.2
GTEX-169BO-0126-SM-79OLS 50-59 years, male 217.0
GTEX-ZAB5-0526-SM-5CVMU 50-59 years, male 215.0
GTEX-1K9T9-0626-SM-CXZKY 50-59 years, female 213.4
GTEX-1F75I-0226-SM-7MKHQ 40-49 years, male 212.2
GTEX-18A6Q-2126-SM-HAV3C 60-69 years, male 211.3
GTEX-17HII-2326-SM-GRR1X 50-59 years, male 209.3
GTEX-ZDTT-1026-SM-5KM19 60-69 years, male 209.1
GTEX-14XAO-0126-SM-HAV2B 60-69 years, female 208.6
GTEX-145MN-0126-SM-5RQHY 30-39 years, male 207.9
GTEX-13S86-0126-SM-5S2PI 40-49 years, male 206.3
GTEX-1PWST-1626-SM-EXOIU 70-79 years, male 205.5
GTEX-1399S-0226-SM-5IFFG 30-39 years, female 203.5
GTEX-1C4CL-0626-SM-731DM 30-39 years, male 203.4
GTEX-1C64O-1626-SM-731EN 60-69 years, male 201.4
GTEX-1HCU7-1426-SM-CNNQK 50-59 years, male 201.2
GTEX-UPK5-1626-SM-4JBHI 40-49 years, male 200.9
GTEX-15DYW-1426-SM-6LPIW 60-69 years, female 200.2
GTEX-1RMOY-0726-SM-EV79D 50-59 years, male 199.8
GTEX-QV31-0126-SM-447BP 30-39 years, male 197.0
GTEX-WXYG-0126-SM-4OND7 50-59 years, female 197.0
GTEX-QDT8-1526-SM-EXOHP 30-39 years, female 196.9
GTEX-13X6H-0726-SM-5Q5BX 50-59 years, female 196.6
GTEX-1GZ4H-0126-SM-9JGGI 50-59 years, female 195.9
GTEX-1L5NE-0926-SM-D4P3P 50-59 years, male 195.7
GTEX-ZLWG-0426-SM-4WWFA 50-59 years, female 195.2
GTEX-14PJ5-0326-SM-664OD 60-69 years, female 194.6
GTEX-1K2DA-0126-SM-CGQGV 50-59 years, male 194.5
GTEX-1MCC2-0826-SM-EV7AM 30-39 years, female 194.3
GTEX-1NHNU-0226-SM-HK79X 50-59 years, male 194.2
GTEX-11NSD-0426-SM-5N9CR 20-29 years, male 192.7
GTEX-NFK9-1426-SM-43ISG 40-49 years, male 192.4
GTEX-11XUK-0426-SM-5EQML 40-49 years, female 192.1
GTEX-1R9PM-0126-SM-DPRY6 20-29 years, male 191.1
GTEX-146FQ-0626-SM-5LU9U 30-39 years, male 189.3
GTEX-18D9B-0126-SM-HAV21 60-69 years, male 189.2
GTEX-1IDJC-0126-SM-C1YQC 50-59 years, male 188.8
GTEX-1IDJD-0726-SM-GA916 30-39 years, male 188.6
GTEX-1PDJ9-0226-SM-DPRYX 20-29 years, male 188.5
GTEX-1PPH8-1126-SM-HL9SW 20-29 years, male 188.3
GTEX-1QW4Y-0126-SM-DPRZQ 30-39 years, male 187.7
GTEX-1H1E6-0226-SM-GA8YV 30-39 years, male 186.7
GTEX-1IDJU-0426-SM-GA8YH 60-69 years, female 186.5
GTEX-ZPIC-0126-SM-DNZZ9 40-49 years, female 186.1
GTEX-Y5LM-0326-SM-4VBRN 40-49 years, female 185.9
GTEX-13PVR-0326-SM-5RQJY 60-69 years, female 185.2
GTEX-15ETS-3126-SM-6LPKN 40-49 years, female 184.4
GTEX-PX3G-0926-SM-48U12 20-29 years, female 183.9
GTEX-ZPCL-0626-SM-DNZZ6 60-69 years, female 183.8
GTEX-1JKYR-1126-SM-CGQGJ 20-29 years, male 182.9
GTEX-1QP2A-2526-SM-EXOJB 50-59 years, male 182.6
GTEX-ZTPG-2126-SM-H6Q6N 20-29 years, female 182.6
GTEX-1QCLZ-1026-SM-E6CR1 60-69 years, female 182.5
GTEX-14PKU-0526-SM-6871A 40-49 years, female 181.5
GTEX-1399R-0226-SM-5IJGG 30-39 years, male 181.0
GTEX-14E6E-1226-SM-5S2R5 30-39 years, male 180.8
GTEX-16A39-0126-SM-H7OFU 30-39 years, female 180.4
GTEX-1122O-0526-SM-5N9DM 60-69 years, female 180.0
GTEX-17F9E-1126-SM-79OMO 50-59 years, male 179.2
GTEX-1RAZR-1626-SM-EAZ4V 40-49 years, male 178.9
GTEX-1M5QR-0126-SM-F2I23 40-49 years, male 177.8
GTEX-R55C-0126-SM-48FEQ 40-49 years, male 177.2
GTEX-1C475-1126-SM-7MGY7 40-49 years, female 176.7
GTEX-ZZPU-0126-SM-5E446 50-59 years, female 176.6
GTEX-QV44-0126-SM-CJI1X 50-59 years, male 176.4
GTEX-13FH7-1326-SM-5IFG8 50-59 years, female 176.1
GTEX-ZF2S-0326-SM-4WKGD 50-59 years, female 176.1
GTEX-144GN-2126-SM-5O99D 50-59 years, male 176.0
GTEX-13OVK-0426-SM-7KFT8 40-49 years, male 175.3
GTEX-17GQL-0126-SM-72D5Q 60-69 years, male 175.2
GTEX-W5WG-0626-SM-4SOID 50-59 years, female 175.2
GTEX-XGQ4-0126-SM-4AT4H 50-59 years, male 175.1
GTEX-P4QT-0926-SM-EZ6KQ 50-59 years, female 175.0
GTEX-PLZ6-0126-SM-48TC6 30-39 years, male 174.5
GTEX-ZLV1-0326-SM-HL9UA 60-69 years, female 174.4
GTEX-1HCU9-0126-SM-9WG7M 20-29 years, male 173.9
GTEX-VJYA-0126-SM-4KL1P 60-69 years, male 173.9
GTEX-12WSK-0126-SM-5GCO7 40-49 years, female 173.7
GTEX-1F5PK-0726-SM-7MGXN 50-59 years, male 173.7
GTEX-XXEK-0126-SM-4BRVU 50-59 years, male 173.6
GTEX-1LVAN-1026-SM-CNNQZ 50-59 years, female 173.3
GTEX-OIZF-0926-SM-7MKH7 60-69 years, male 173.1
GTEX-1B97J-1926-SM-7IGQB 50-59 years, female 170.7
GTEX-PW2O-0126-SM-48TC8 20-29 years, male 170.5
GTEX-1J8QM-0926-SM-C1YQ9 60-69 years, female 167.5
GTEX-ZG7Y-2026-SM-DO91N 50-59 years, male 167.0
GTEX-1MUQO-1326-SM-EV7AE 60-69 years, male 166.1
GTEX-14ICL-0126-SM-664NG 30-39 years, male 165.1
GTEX-1AX9K-0226-SM-793CM 50-59 years, male 164.3
GTEX-14DAR-0326-SM-5S2PS 50-59 years, male 164.2
GTEX-1RB15-0126-SM-G9ERT 60-69 years, male 162.6
GTEX-15RJ7-0126-SM-6LPJN 40-49 years, male 162.4
GTEX-139T6-0226-SM-5IFGZ 50-59 years, male 162.1
GTEX-15RIG-0126-SM-6PAN4 40-49 years, male 162.1
GTEX-14PK6-0526-SM-69LOF 70-79 years, female 161.9
GTEX-ZLFU-0526-SM-4WWBN 40-49 years, male 161.7
GTEX-1CB4F-0226-SM-7EPHS 60-69 years, male 161.5
GTEX-ZP4G-0326-SM-4YCEF 20-29 years, female 161.3
GTEX-13PL7-1126-SM-5MR5O 60-69 years, female 159.8
GTEX-1QP66-0126-SM-EAZ3N 50-59 years, male 159.5
GTEX-1JKYN-0326-SM-AHZ4D 30-39 years, male 158.5
GTEX-131XE-1126-SM-5EGHW 50-59 years, male 158.4
GTEX-16NFA-0226-SM-HAUYF 50-59 years, male 155.3
GTEX-1AYD5-0226-SM-79ONV 50-59 years, male 152.2
GTEX-Y3I4-0126-SM-4TT26 50-59 years, male 151.1
GTEX-Z9EW-0726-SM-5HL9H 40-49 years, male 151.1
GTEX-OOBJ-0926-SM-48TDO 60-69 years, male 149.5
GTEX-QCQG-0226-SM-48U28 50-59 years, female 149.0
GTEX-16AAH-0126-SM-HAV23 50-59 years, male 148.7
GTEX-139YR-0426-SM-5IFFV 50-59 years, male 145.2
GTEX-1IDJE-0126-SM-C1YQ6 50-59 years, female 143.5
GTEX-XQ8I-1726-SM-4BOQB 50-59 years, male 142.8
GTEX-15DZA-0126-SM-6PAMV 30-39 years, female 141.5
GTEX-11DXX-0726-SM-5H12X 60-69 years, female 138.8
GTEX-117YX-2126-SM-5GIEL 50-59 years, male 138.3
GTEX-14PN3-0226-SM-6871K 60-69 years, female 137.9
GTEX-12WSN-0126-SM-5DUX5 40-49 years, male 137.8
GTEX-15SHV-0126-SM-6LPIS 60-69 years, male 137.5
GTEX-QESD-0126-SM-EXOHG 20-29 years, male 137.4
GTEX-Q2AH-0226-SM-48U1I 40-49 years, male 136.7
GTEX-11VI4-0126-SM-5GU6Z 40-49 years, female 136.3
GTEX-1S831-0726-SM-EV79O 20-29 years, male 135.6
GTEX-1KAFJ-1026-SM-D4P2Z 50-59 years, male 135.1
GTEX-146FR-1926-SM-5NQA6 60-69 years, female 131.7
GTEX-1GF9U-0126-SM-AHZ4G 40-49 years, female 131.1
GTEX-ZVP2-0526-SM-51MSC 50-59 years, male 130.8
GTEX-1CB4I-1426-SM-79OLZ 50-59 years, male 130.2
GTEX-15CHC-0726-SM-6AJ9D 60-69 years, female 129.1
GTEX-1J8Q3-0126-SM-C1YSI 60-69 years, male 128.2
GTEX-13N11-0126-SM-5KM2Z 50-59 years, female 127.6
GTEX-15DCE-0126-SM-HAV2T 20-29 years, male 127.6
GTEX-1HSMQ-0126-SM-D4P2I 50-59 years, male 125.7
GTEX-1H3VY-1526-SM-9WG7S 50-59 years, male 122.9
GTEX-14PJ6-0226-SM-6AJ9K 60-69 years, female 122.8
GTEX-1QP29-0126-SM-EAZ3S 50-59 years, male 122.2
GTEX-11P7K-0426-SM-5BC5H 30-39 years, male 122.1
GTEX-1RAZA-1026-SM-E6CQ9 20-29 years, male 120.2
GTEX-Y3IK-0126-SM-4WWE9 50-59 years, female 120.1
GTEX-Y8LW-0126-SM-4VBS1 50-59 years, female 119.6
GTEX-WYJK-0726-SM-G8W7Z 50-59 years, male 118.5
GTEX-11LCK-0126-SM-5A5M5 30-39 years, male 118.1
GTEX-1F5PL-2226-SM-7MKHE 40-49 years, female 117.9
GTEX-XAJ8-0126-SM-47JYG 40-49 years, male 117.8
GTEX-1LG7Z-0126-SM-EV79V 30-39 years, male 116.5
GTEX-OHPL-0926-SM-G9ER4 60-69 years, female 116.0
GTEX-13VXT-1326-SM-5LU3Y 20-29 years, female 115.0
GTEX-1RAZQ-0126-SM-EV7B1 30-39 years, male 114.8
GTEX-X3Y1-0126-SM-4PQZA 40-49 years, male 114.7
GTEX-1AMFI-0926-SM-731E4 50-59 years, female 113.4
GTEX-YEC4-0126-SM-4W21T 40-49 years, male 113.4
GTEX-WYVS-0126-SM-4ONDH 40-49 years, female 112.2
GTEX-1A3MV-0126-SM-731FQ 30-39 years, male 111.6
GTEX-1MJIX-0126-SM-HL9SS 40-49 years, male 110.9
GTEX-1B8KZ-0226-SM-7EWF6 50-59 years, male 107.5
GTEX-1KXAM-0126-SM-HL9S2 60-69 years, male 106.9
GTEX-XYKS-0126-SM-HL9TA 60-69 years, female 104.2
GTEX-1JK1U-0126-SM-C1YQY 60-69 years, male 103.1
GTEX-18A66-1826-SM-7KFSU 60-69 years, male 97.0
GTEX-15SB6-0126-SM-6LPJR 50-59 years, female 96.9
GTEX-1R7EV-0126-SM-EAZ3O 40-49 years, male 91.0
GTEX-1QCLY-0126-SM-DPRZV 30-39 years, male 89.2
GTEX-ZDYS-1026-SM-4WKHC 50-59 years, male 87.6
GTEX-13U4I-1626-SM-5IFFR 40-49 years, female 84.1
GTEX-1LGRB-0126-SM-CNNR6 50-59 years, female 78.2
Show allShow less

SPLEEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

325.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spleen
Scaled Tags Per Million: 325.6
FF:10025-101D7 39,50,70 years, male 325.6

SPLEEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.2
Macaque sample Sample description nTPM
Spleen
nTPM: 62.2
Samples: 3

Max nTPM: 71.5
Min nTPM: 48.5
Sample A 48.5
Sample B 66.7
Sample D 71.5

SPLEEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.1
Pig sample Sample description nTPM
Spleen
nTPM: 58.1
Samples: 4

Max nTPM: 63.7
Min nTPM: 52.7
Sample A Female 55.0
Sample B Female 60.9
Sample C Male 52.7
Sample D Male 63.7

SPLEEN - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.6
Mouse sample Sample description nTPM
Spleen
nTPM: 33.7
Samples: 4

Max nTPM: 38.4
Min nTPM: 28.7
Sample C 33.5
Sample D 28.7
Sample A 34.0
Sample B 38.4

SPLEEN - Rat RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.0
Rat sample Sample description nTPM
Spleen
nTPM: 54.1
Samples: 4

Max nTPM: 60.0
Min nTPM: 47.8
Sample A 59.7
Sample A 47.8
Sample A 48.7
Sample A 60.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.