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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • SH3GL2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

80.939
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:36.6 nTPM
HPA Brain:61.3 nTPM
GTEx:36.6 nTPM
Pig:46.0 nTPM
Mouse:129.4 nTPM
Allen mouse:8.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA026685
Hypothalamus mean intensity 80.939
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 80.775
Periventricular hypothalamic nucleus 38.047
Supraoptic nucleus -
Tuberal nucleus 80.939
Ventral tuberomammillary nucleus 73.347
Lateral preoptic area -
Medial preoptic area -
Suprachiasmatic nucleus 36.629
Paraventricular hypothalamic nucleus 37.984
Anterior hypothalamic area, central 30.688
Ventral medial hypothalamic nucleus 71.255
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 80.745
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 49.258
Dorsal medial hypothalamic nucleus 61.404
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 49.8
2226 Male, age 75, left hemisphere 67.7
1961 Female, age 42, unknown 31.8
Dorsomedial nucleus
nTPM: 45.6
1989 Male, age 62, unknown 78.3
2041 Female, age 72, unknown 29.9
2017 Female, age 42, unknown 28.6
Lateral hypothalamic area
nTPM: 51.5
2228 Male, age 66, unknown 76.9
2271 Male, age 75, both hemispheres 52.7
1791 Male, age 80, right hemisphere 50.8
2412 Male, age 62, unknown 25.7
Mammillary body
nTPM: 61.3
1923 Female, age 72, unknown 105.6
2413 Male, age 66, unknown 73.6
1834 Female, age 42, unknown 46.5
1948 Female, age 72, unknown 41.0
1945 Male, age 80, right hemisphere 39.9
Paraventricular nucleus
nTPM: 23.8
2700 Male, age 62, unknown 23.8
Preoptic area
nTPM: 37.0
1907 Male, age 80, right hemisphere 52.8
1861 Female, age 42, unknown 31.0
2414 Female, age 72, unknown 27.1
Supraoptic nucleus
nTPM: 37.0
1894 Female, age 72, unknown 50.4
2835 Female, age 72, unknown 31.5
2043 Male, age 62, unknown 29.1
Ventromedial nucleus
nTPM: 43.1
1982 Female, age 72, unknown 50.0
1822 Female, age 42, unknown 36.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 36.6
Samples: 257

Max nTPM: 168.6
Min nTPM: 7.9
Std nTPM: 17.8
Median nTPM: 34.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 168.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 168.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 98.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 95.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 90.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 78.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 77.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 75.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 75.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 73.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 72.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 67.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 60.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 54.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 54.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 53.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 52.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 52.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 51.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 51.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 51.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 50.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 50.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 50.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 50.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 50.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 49.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 49.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 48.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 48.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 48.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 48.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 48.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 47.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 47.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 47.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 47.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 47.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 47.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 46.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 46.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 46.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 46.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 45.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 45.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 45.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 45.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 44.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 44.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 43.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 43.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 43.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 43.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 42.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 42.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 42.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 42.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 42.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 42.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 42.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 41.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 41.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 41.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 41.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 41.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 41.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 41.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 41.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 41.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 41.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 41.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 41.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 40.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 40.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 40.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 40.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 40.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 40.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 40.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 39.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 39.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 39.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 39.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 39.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 39.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 39.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 39.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 39.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 39.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 39.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 39.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 38.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 38.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 38.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 38.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 38.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 38.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 38.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 37.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 37.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 37.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 37.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 37.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 36.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 36.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 36.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 36.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 36.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 36.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 36.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 36.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 36.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 36.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 35.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 35.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 35.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 35.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 35.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 35.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 35.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 35.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 35.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 34.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 34.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 34.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 34.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 34.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 34.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 34.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 34.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 34.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 34.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 34.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 33.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 33.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 33.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 33.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 33.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 33.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 33.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 33.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 32.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 32.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 32.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 32.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 32.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 32.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 32.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 32.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 32.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 32.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 32.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 31.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 31.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 31.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 31.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 31.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 31.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 31.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 31.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 31.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 31.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 31.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 31.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 31.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 31.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 30.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 30.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 30.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 30.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 30.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 30.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 30.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 30.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 30.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 29.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 29.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 29.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 29.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 29.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 29.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 28.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 28.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 28.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 28.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 28.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 28.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 28.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 28.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 27.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 27.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 27.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 27.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 27.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 27.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 27.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 26.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 26.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 26.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 26.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 26.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 26.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 26.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 26.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 26.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 26.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 26.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 26.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 25.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 25.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 25.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 25.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 25.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 25.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 25.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 25.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 25.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 25.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 24.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 24.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 24.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 24.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 23.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 23.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 23.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 22.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 22.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 22.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 21.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 21.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 21.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 20.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 19.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 19.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 19.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 19.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 18.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 18.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 17.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 16.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 16.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 16.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 16.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 15.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 15.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 14.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 14.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 14.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 13.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 12.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 12.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 12.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 11.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 10.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 10.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 10.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 7.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 46.0
Samples: 4

Max nTPM: 57.7
Min nTPM: 39.5
Sample A Female 57.7
Sample B Female 47.1
Sample C Male 39.8
Sample D Male 39.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 129.4
Samples: 4

Max nTPM: 137.2
Min nTPM: 119.8
Sample A Male 128.9
Sample B Male 131.7
Sample C Female 137.2
Sample D Female 119.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.3
74581397 Antisense, RP_060117_02_C06, Mouse strain C57BL/6J (56 days, male) 12.5
68196982 Antisense, RP_040928_01_B03, Mouse strain C57BL/6J (56 days, male) 4.1

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