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  • SUMMARY

  • TISSUE

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  • ABCA2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:41.4 nTPM
HPA Brain:350.6 nTPM
GTEx:41.4 nTPM
Pig:129.8 nTPM
Mouse:67.4 nTPM
Allen mouse:10.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

350.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 97.1
2226 Male, age 75, left hemisphere 106.2
1961 Female, age 42, unknown 87.9
Dorsomedial nucleus
nTPM: 192.3
2017 Female, age 42, unknown 278.1
1989 Male, age 62, unknown 212.2
2041 Female, age 72, unknown 86.6
Lateral hypothalamic area
nTPM: 245.7
2271 Male, age 75, both hemispheres 322.0
2228 Male, age 66, unknown 271.8
1791 Male, age 80, right hemisphere 209.0
2412 Male, age 62, unknown 180.0
Mammillary body
nTPM: 350.6
1945 Male, age 80, right hemisphere 460.3
1948 Female, age 72, unknown 390.7
1834 Female, age 42, unknown 363.5
1923 Female, age 72, unknown 269.7
2413 Male, age 66, unknown 269.0
Paraventricular nucleus
nTPM: 294.8
2700 Male, age 62, unknown 294.8
Preoptic area
nTPM: 261.1
2414 Female, age 72, unknown 429.1
1861 Female, age 42, unknown 252.4
1907 Male, age 80, right hemisphere 101.7
Supraoptic nucleus
nTPM: 240.4
2043 Male, age 62, unknown 329.6
1894 Female, age 72, unknown 198.9
2835 Female, age 72, unknown 192.6
Ventromedial nucleus
nTPM: 101.1
1982 Female, age 72, unknown 119.3
1822 Female, age 42, unknown 83.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 41.4
Samples: 257

Max nTPM: 221.0
Min nTPM: 4.1
Std nTPM: 32.6
Median nTPM: 30.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 221.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 170.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 162.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 147.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 137.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 134.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 130.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 130.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 121.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 112.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 111.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 110.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 109.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 107.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 106.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 102.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 97.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 97.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 97.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 96.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 92.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 90.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 90.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 89.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 89.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 88.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 88.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 87.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 85.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 85.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 85.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 84.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 84.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 82.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 81.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 77.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 73.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 72.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 68.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 68.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 65.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 64.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 64.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 64.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 64.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 63.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 63.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 62.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 61.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 60.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 60.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 59.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 57.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 57.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 56.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 56.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 55.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 54.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 54.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 53.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 53.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 53.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 52.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 52.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 52.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 51.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 50.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 49.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 49.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 49.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 49.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 47.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 47.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 46.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 46.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 46.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 45.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 45.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 45.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 44.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 44.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 43.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 43.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 43.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 43.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 42.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 42.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 42.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 42.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 41.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 40.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 40.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 39.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 39.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 39.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 39.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 38.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 38.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 38.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 38.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 37.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 37.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 37.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 37.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 37.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 36.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 36.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 36.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 36.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 36.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 35.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 35.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 33.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 33.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 33.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 33.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 32.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 32.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 32.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 32.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 32.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 32.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 32.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 31.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 31.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 31.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 30.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 30.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 30.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 30.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 30.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 30.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 29.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 29.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 29.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 29.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 29.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 29.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 28.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 28.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 28.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 28.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 28.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 28.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 28.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 27.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 27.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 27.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 27.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 27.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 26.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 26.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 26.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 26.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 25.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 25.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 25.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 25.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 25.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 25.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 25.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 24.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 24.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 24.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 24.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 24.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 23.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 23.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 23.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 23.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 23.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 23.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 23.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 23.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 23.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 22.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 22.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 21.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 21.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 21.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 21.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 21.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 20.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 20.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 20.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 20.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 20.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 20.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 20.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 19.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 19.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 19.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 19.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 18.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 18.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 18.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 18.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 18.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 17.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 17.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 17.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 17.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 16.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 16.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 16.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 16.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 16.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 16.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 16.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 16.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 16.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 16.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 16.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 16.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 15.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 15.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 15.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 15.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 15.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 15.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 15.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 15.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 15.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 15.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 15.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 15.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 15.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 15.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 14.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 14.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 14.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 14.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 14.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 14.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 13.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 13.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 13.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 13.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 13.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 12.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 12.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 11.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 11.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 11.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 11.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 11.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 9.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 9.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 8.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 8.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 8.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 8.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 5.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 5.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 5.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 4.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 4.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 129.7
Samples: 4

Max nTPM: 156.4
Min nTPM: 67.5
Sample A Female 150.6
Sample B Female 144.4
Sample C Male 156.4
Sample D Male 67.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 67.4
Samples: 4

Max nTPM: 71.5
Min nTPM: 64.4
Sample A Male 65.5
Sample B Male 64.4
Sample C Female 68.3
Sample D Female 71.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.9
69514530 Antisense, RP_050419_03_E11, Mouse strain C57BL/6J (56 days, male) 10.9

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