HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:1079.6 nTPM
HPA Brain:424.1 nTPM
GTEx:1079.6 nTPM
FANTOM5:563.6 Scaled Tags Per Million
Pig:154.7 nTPM
Mouse:177.9 nTPM
Allen mouse:12.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050459
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 424.1
Sample id Sample description nTPM
Hippocampus
nTPM: 424.1
2529 Female, age 94, left hemisphere 484.2
2621 Female, age 67, right hemisphere 439.5
1855 Male, age 76, left hemisphere 429.7
1898 Male, age 80, left hemisphere 421.8
1911 Female, age 85, right hemisphere 403.9
2148 Female, age 91, left hemisphere 365.5
Dentate gyrus
nTPM: 414.1
2530 Female, age 94, left hemisphere 532.1
2010 Male, age 76, both hemispheres 486.4
2531 Female, age 67, both hemispheres 439.9
2246 Female, age 85, both hemispheres 398.6
2528 Male, age 74, both hemispheres 326.8
1927 Female, age 91, both hemispheres 301.0
Entorhinal gyrus
nTPM: 363.1
2686 Male, age 75, right hemisphere 431.4
1787 Male, age 76, left hemisphere 399.3
2117 Female, age 91, right hemisphere 382.8
1938 Female, age 85, left hemisphere 333.5
2764 Male, age 80, right hemisphere 329.5
2613 Female, age 94, left hemisphere 301.9
Hippocampus, CA1
nTPM: 378.9
2045 Male, age 76, both hemispheres 444.7
1873 Female, age 85, both hemispheres 394.0
2527 Male, age 74, both hemispheres 361.5
2749 Male, age 80, left hemisphere 353.4
2082 Female, age 91, right hemisphere 340.9
Hippocampus, CA2
nTPM: 344.0
2437 Female, age 94, left hemisphere 438.2
1892 Male, age 76, both hemispheres 348.2
2113 Female, age 91, right hemisphere 338.8
1940 Female, age 85, left hemisphere 320.6
1963 Male, age 80, left hemisphere 313.6
2249 Male, age 74, both hemispheres 304.4
Hippocampus, CA3
nTPM: 373.1
2861 Female, age 67, both hemispheres 417.9
1867 Male, age 76, both hemispheres 415.7
2620 Female, age 94, left hemisphere 384.5
1891 Female, age 85, both hemispheres 374.9
2436 Male, age 74, both hemispheres 333.0
2137 Male, age 80, left hemisphere 312.5
Parahippocampal cortex
nTPM: 352.1
2018 Male, age 76, both hemispheres 473.6
2532 Female, age 72, left hemisphere 422.8
2245 Female, age 91, both hemispheres 410.4
2692 Male, age 74, both hemispheres 356.3
1850 Male, age 80, both hemispheres 342.0
2622 Female, age 67, right hemisphere 325.9
1933 Female, age 85, both hemispheres 325.3
1990 Female, age 91, right hemisphere 311.2
2250 Female, age 67, right hemisphere 310.1
2693 Female, age 94, both hemispheres 243.0
Perirhinal gyrus
nTPM: 338.1
1794 Male, age 80, right hemisphere 366.6
1847 Female, age 91, left hemisphere 359.3
1841 Female, age 85, right hemisphere 329.5
2521 Female, age 94, right hemisphere 318.1
2848 Male, age 76, right hemisphere 317.0
Subiculum
nTPM: 417.1
2438 Female, age 94, left hemisphere 579.2
2042 Male, age 76, both hemispheres 482.2
1977 Female, age 85, both hemispheres 401.1
1901 Male, age 80, both hemispheres 386.0
2619 Male, age 74, both hemispheres 337.6
2729 Female, age 91, right hemisphere 316.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1079.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1079.6
Samples: 255

Max nTPM: 2676.7
Min nTPM: 530.9
Std nTPM: 398.5
Median nTPM: 989.4
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2676.7
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2576.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2545.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 2453.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2219.5
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 2054.8
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 2040.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2001.9
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 1935.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 1919.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1906.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 563.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 563.6
FF:10169-103B7 60 years, female 776.8
FF:10153-102I9 76 years, female 350.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 154.7
Pig sample Sample description nTPM
Subiculum
nTPM: 121.8
Samples: 4

Max nTPM: 173.6
Min nTPM: 102.5
Sample A Female 173.6
Sample B Female 103.1
Sample C Male 102.5
Sample D Male 107.9
Dorsal hippocampus
nTPM: 154.7
Samples: 4

Max nTPM: 212.6
Min nTPM: 110.9
Sample A Female 212.6
Sample B Female 129.8
Sample C Male 165.3
Sample D Male 110.9
Entorhinal cortex
nTPM: 127.5
Samples: 4

Max nTPM: 140.5
Min nTPM: 109.5
Sample A Female 127.3
Sample B Female 132.6
Sample C Male 140.5
Sample D Male 109.5
Ventral hippocampus
nTPM: 141.4
Samples: 4

Max nTPM: 173.8
Min nTPM: 99.8
Sample A Female 149.8
Sample B Female 99.8
Sample C Male 173.8
Sample D Male 142.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 177.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 168.7
Samples: 4

Max nTPM: 186.7
Min nTPM: 147.7
Sample A Male 182.9
Sample B Male 147.7
Sample C Female 186.7
Sample D Female 157.6
Hippocampal formation
nTPM: 178.0
Samples: 4

Max nTPM: 190.6
Min nTPM: 168.6
Sample A Male 183.4
Sample B Male 169.2
Sample C Female 168.6
Sample D Female 190.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
69173436 Antisense, RP_050329_01_E12, Mouse strain C57BL/6J (56 days, male) 12.4

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