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  • TISSUE

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  • RAB5C
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:82.3 nTPM
HPA Brain:142.3 nTPM
GTEx:82.3 nTPM
Pig:170.2 nTPM
Mouse:110.3 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 105.3
2226 Male, age 75, left hemisphere 113.2
1961 Female, age 42, unknown 97.3
Dorsomedial nucleus
nTPM: 112.7
1989 Male, age 62, unknown 133.1
2041 Female, age 72, unknown 108.8
2017 Female, age 42, unknown 96.2
Lateral hypothalamic area
nTPM: 112.9
2271 Male, age 75, both hemispheres 130.3
1791 Male, age 80, right hemisphere 130.2
2228 Male, age 66, unknown 97.7
2412 Male, age 62, unknown 93.5
Mammillary body
nTPM: 142.3
2413 Male, age 66, unknown 164.5
1923 Female, age 72, unknown 151.5
1945 Male, age 80, right hemisphere 135.1
1834 Female, age 42, unknown 134.8
1948 Female, age 72, unknown 125.8
Paraventricular nucleus
nTPM: 103.2
2700 Male, age 62, unknown 103.2
Preoptic area
nTPM: 107.8
1861 Female, age 42, unknown 114.0
2414 Female, age 72, unknown 111.8
1907 Male, age 80, right hemisphere 97.7
Supraoptic nucleus
nTPM: 131.8
1894 Female, age 72, unknown 138.8
2043 Male, age 62, unknown 134.4
2835 Female, age 72, unknown 122.1
Ventromedial nucleus
nTPM: 99.5
1982 Female, age 72, unknown 105.0
1822 Female, age 42, unknown 94.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 82.3
Samples: 257

Max nTPM: 151.9
Min nTPM: 53.3
Std nTPM: 16.0
Median nTPM: 80.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 151.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 151.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 150.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 134.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 129.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 125.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 125.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 120.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 119.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 117.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 117.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 117.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 116.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 114.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 110.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 109.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 108.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 107.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 106.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 105.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 102.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 102.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 102.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 101.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 101.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 100.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 100.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 99.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 98.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 98.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 98.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 97.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 97.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 96.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 96.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 95.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 95.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 95.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 95.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 95.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 95.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 93.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 93.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 93.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 93.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 92.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 92.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 92.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 92.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 92.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 92.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 92.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 91.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 91.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 91.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 90.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 90.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 90.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 90.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 90.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 90.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 89.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 89.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 89.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 89.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 89.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 88.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 88.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 88.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 88.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 88.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 88.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 88.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 87.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 87.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 87.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 87.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 87.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 87.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 86.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 86.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 86.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 86.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 86.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 86.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 85.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 85.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 85.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 85.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 85.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 85.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 85.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 85.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 85.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 84.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 84.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 84.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 84.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 84.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 84.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 84.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 84.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 84.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 84.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 83.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 83.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 83.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 83.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 83.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 82.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 82.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 82.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 82.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 82.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 82.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 82.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 81.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 81.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 81.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 81.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 81.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 81.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 81.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 80.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 80.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 80.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 80.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 80.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 80.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 79.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 79.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 79.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 79.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 79.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 79.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 79.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 78.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 78.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 78.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 78.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 78.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 78.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 78.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 78.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 78.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 78.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 77.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 77.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 77.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 77.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 76.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 76.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 76.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 76.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 76.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 76.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 76.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 76.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 76.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 76.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 75.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 75.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 75.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 75.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 75.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 75.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 75.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 75.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 74.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 74.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 74.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 74.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 74.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 74.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 73.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 73.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 73.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 73.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 73.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 72.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 72.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 72.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 72.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 72.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 72.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 72.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 72.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 72.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 72.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 72.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 72.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 71.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 71.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 71.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 71.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 71.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 70.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 70.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 70.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 70.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 70.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 70.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 70.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 69.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 69.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 69.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 69.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 69.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 68.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 68.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 68.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 68.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 68.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 68.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 68.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 68.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 68.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 67.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 67.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 67.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 66.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 66.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 66.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 66.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 66.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 66.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 66.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 66.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 65.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 65.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 65.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 65.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 65.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 65.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 64.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 64.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 64.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 64.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 64.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 63.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 63.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 62.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 62.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 61.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 61.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 61.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 60.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 60.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 60.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 59.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 58.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 58.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 57.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 56.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 56.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 53.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 53.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 170.2
Samples: 4

Max nTPM: 199.3
Min nTPM: 128.1
Sample A Female 199.3
Sample B Female 171.6
Sample C Male 181.7
Sample D Male 128.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 110.3
Samples: 4

Max nTPM: 122.0
Min nTPM: 104.8
Sample A Male 107.2
Sample B Male 122.0
Sample C Female 107.0
Sample D Female 104.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
71486970 Antisense, RP_050913_01_A08, Mouse strain C57BL/6J (56 days, male) 0.0

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