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  • TISSUE

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  • YWHAE
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:438.7 nTPM
HPA Brain:350.2 nTPM
GTEx:438.7 nTPM
Pig:1033.6 nTPM
Mouse:617.6 nTPM
Allen mouse:7.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

350.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 307.9
2226 Male, age 75, left hemisphere 347.5
1961 Female, age 42, unknown 268.3
Dorsomedial nucleus
nTPM: 266.1
1989 Male, age 62, unknown 279.8
2041 Female, age 72, unknown 276.6
2017 Female, age 42, unknown 241.9
Lateral hypothalamic area
nTPM: 308.5
1791 Male, age 80, right hemisphere 355.1
2271 Male, age 75, both hemispheres 349.5
2228 Male, age 66, unknown 318.1
2412 Male, age 62, unknown 211.0
Mammillary body
nTPM: 303.5
1923 Female, age 72, unknown 377.3
1834 Female, age 42, unknown 292.6
1945 Male, age 80, right hemisphere 286.1
1948 Female, age 72, unknown 283.2
2413 Male, age 66, unknown 278.4
Paraventricular nucleus
nTPM: 294.1
2700 Male, age 62, unknown 294.1
Preoptic area
nTPM: 249.6
1907 Male, age 80, right hemisphere 282.7
1861 Female, age 42, unknown 244.0
2414 Female, age 72, unknown 222.1
Supraoptic nucleus
nTPM: 350.2
1894 Female, age 72, unknown 428.1
2043 Male, age 62, unknown 340.4
2835 Female, age 72, unknown 282.2
Ventromedial nucleus
nTPM: 313.4
1982 Female, age 72, unknown 340.0
1822 Female, age 42, unknown 286.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

438.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 438.7
Samples: 257

Max nTPM: 831.4
Min nTPM: 239.8
Std nTPM: 89.9
Median nTPM: 429.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 831.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 782.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 775.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 755.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 687.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 677.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 670.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 658.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 647.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 630.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 627.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 621.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 606.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 604.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 603.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 599.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 591.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 591.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 583.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 564.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 558.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 544.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 543.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 542.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 540.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 539.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 539.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 534.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 534.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 532.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 528.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 526.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 523.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 517.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 517.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 515.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 509.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 507.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 507.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 507.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 506.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 504.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 504.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 502.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 501.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 498.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 496.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 495.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 495.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 495.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 495.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 495.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 493.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 493.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 493.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 491.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 491.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 491.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 490.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 488.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 487.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 486.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 485.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 484.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 483.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 482.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 481.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 480.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 479.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 479.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 477.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 476.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 475.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 474.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 473.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 473.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 470.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 469.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 469.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 468.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 468.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 468.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 467.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 464.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 463.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 463.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 462.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 460.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 460.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 459.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 459.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 457.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 453.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 450.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 448.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 448.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 447.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 446.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 445.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 445.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 444.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 444.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 444.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 443.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 441.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 440.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 440.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 440.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 439.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 439.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 439.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 436.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 435.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 435.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 435.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 435.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 435.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 435.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 434.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 434.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 434.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 432.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 432.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 432.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 430.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 430.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 429.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 429.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 429.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 428.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 427.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 427.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 426.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 424.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 424.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 424.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 423.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 422.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 421.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 421.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 421.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 420.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 420.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 419.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 419.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 417.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 417.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 416.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 416.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 416.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 416.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 415.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 415.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 414.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 412.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 411.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 410.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 410.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 409.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 409.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 409.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 408.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 407.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 403.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 403.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 402.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 402.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 401.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 399.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 399.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 398.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 398.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 397.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 397.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 396.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 395.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 395.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 394.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 394.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 393.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 393.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 391.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 391.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 390.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 387.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 387.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 386.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 386.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 385.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 384.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 383.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 382.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 382.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 379.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 376.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 376.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 375.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 374.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 371.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 370.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 370.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 369.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 367.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 367.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 367.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 366.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 362.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 362.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 361.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 360.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 360.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 359.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 358.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 357.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 356.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 354.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 353.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 353.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 353.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 352.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 351.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 351.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 348.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 347.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 347.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 345.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 345.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 344.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 344.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 342.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 342.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 342.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 341.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 340.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 340.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 340.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 338.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 337.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 337.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 335.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 332.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 329.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 326.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 326.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 322.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 317.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 310.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 307.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 307.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 300.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 299.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 298.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 293.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 264.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 255.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 245.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 239.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1033.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 1033.6
Samples: 4

Max nTPM: 1339.6
Min nTPM: 823.6
Sample A Female 1339.6
Sample B Female 1013.8
Sample C Male 957.4
Sample D Male 823.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

617.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 617.7
Samples: 4

Max nTPM: 650.1
Min nTPM: 576.8
Sample A Male 597.1
Sample B Male 646.6
Sample C Female 650.1
Sample D Female 576.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 7.0
2739 Antisense, RP_Baylor_103126, Mouse strain C57BL/6J (56 days, male) 7.0
2740 Antisense, RP_Baylor_103126, Mouse strain C57BL/6J (56 days, male) 2.9

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