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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPL34
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:260.8 nTPM
GTEx:1053.6 nTPM
FANTOM5:29.7 Scaled Tags Per Million
Macaque:6.4 nTPM
Pig:404.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

260.8
Sample id Sample description nTPM
Putamen
nTPM: 260.8
2466 Female, age 79, unknown 375.2
1937 Female, age 91, right hemisphere 294.1
1838 Male, age 80, right hemisphere 257.7
2482 Female, age 94, left hemisphere 254.5
1829 Male, age 74, unknown 247.5
2647 Male, age 75, left hemisphere 211.6
2489 Female, age 72, unknown 185.0

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1053.6
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1053.6
Samples: 254

Max nTPM: 3033.5
Min nTPM: 455.0
Std nTPM: 336.4
Median nTPM: 985.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3033.5
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 2287.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2201.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 2082.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2052.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1941.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1732.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1701.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1697.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1691.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1681.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1670.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1660.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1645.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1633.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1601.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1589.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1587.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1576.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1573.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1572.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1551.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1504.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1495.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1479.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1462.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1456.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1441.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1440.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1435.4
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1428.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1422.6
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1422.3
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1381.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1378.1
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1376.2
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1357.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1352.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1351.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1346.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1343.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1339.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1329.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1322.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1315.4
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1314.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1314.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1308.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1296.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1292.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1279.7
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1275.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1275.3
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1274.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1270.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1264.7
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1259.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1245.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1243.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1237.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1230.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1221.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1220.6
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1219.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1217.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1216.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1214.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1211.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 1205.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1204.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1203.1
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1201.4
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1189.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1185.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1182.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1180.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1180.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1173.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1168.8
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1167.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1167.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 1164.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1162.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1160.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1147.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1137.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1131.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 1128.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1128.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1123.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1120.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1120.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1117.9
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1110.3
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 1109.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1107.3
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 1103.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1093.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1086.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1085.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1071.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1069.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1056.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1055.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1042.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1040.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1035.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1034.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 1025.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1021.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1018.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1017.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1016.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1013.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1009.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 1008.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1007.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 1007.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1004.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 998.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 997.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 993.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 992.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 992.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 992.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 991.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 987.0
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 984.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 983.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 983.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 982.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 980.8
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 979.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 976.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 975.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 974.3
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 968.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 965.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 959.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 959.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 956.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 948.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 945.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 945.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 945.1
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 944.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 944.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 942.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 941.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 938.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 936.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 936.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 933.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 931.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 918.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 918.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 917.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 916.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 915.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 915.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 909.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 908.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 904.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 903.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 893.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 886.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 886.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 882.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 880.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 878.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 877.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 867.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 863.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 861.1
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 860.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 857.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 857.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 850.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 842.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 841.1
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 839.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 834.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 823.5
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 823.5
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 822.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 817.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 814.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 814.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 813.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 811.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 809.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 808.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 808.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 807.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 804.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 802.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 800.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 796.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 791.4
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 786.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 785.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 778.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 777.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 775.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 770.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 768.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 767.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 766.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 765.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 764.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 762.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 756.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 754.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 754.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 748.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 745.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 742.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 738.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 737.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 735.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 728.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 724.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 723.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 712.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 711.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 709.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 707.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 705.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 702.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 698.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 693.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 689.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 686.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 686.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 673.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 672.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 661.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 659.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 658.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 655.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 653.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 642.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 638.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 632.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 632.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 629.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 624.2
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 614.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 601.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 584.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 570.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 568.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 502.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 455.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

29.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 29.7
FF:10176-103C5 60 years, female 29.7

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.4
Macaque sample Sample description nTPM
Putamen
nTPM: 6.4
Samples: 2

Max nTPM: 10.2
Min nTPM: 2.6
Sample A 2.6
Sample B 10.2

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

404.7
Pig sample Sample description nTPM
Putamen
nTPM: 404.7
Samples: 3

Max nTPM: 508.6
Min nTPM: 338.0
Sample B Female 338.0
Sample C Male 508.6
Sample D Male 367.5

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