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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
49.9
nTPM
HPA Brain:
68.8
nTPM
GTEx:
49.9
nTPM
FANTOM5:
78.7
Scaled Tags Per Million
Pig:
35.3
nTPM
Mouse:
42.5
nTPM
Allen mouse:
0.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
68.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 64.4
2666
Male, age 74, left hemisphere
78.4
1827
Male, age 72, unknown
72.9
2586
Male, age 75, left hemisphere
72.6
2828
Female, age 72, unknown
70.6
1870
Female, age 42, unknown
61.3
1830
Male, age 51, unknown
61.2
1833
Male, age 53, unknown
60.5
2019
Male, age 18, unknown
58.9
2411
Female, age 72, unknown
57.6
2219
Male, age 76, both hemispheres
50.4
Dorsal raphe nucleus nTPM: 63.5
2016
Female, age 72, unknown
69.1
2750
Male, age 76, both hemispheres
65.5
2047
Male, age 72, unknown
64.5
1828
Male, age 53, unknown
60.5
2298
Female, age 72, unknown
58.1
Inferior colliculus nTPM: 59.1
1848
Female, age 42, unknown
61.8
1890
Male, age 53, unknown
60.5
2849
Male, age 72, unknown
57.9
2097
Female, age 72, unknown
56.1
Median raphe nucleus nTPM: 53.2
2220
Male, age 76, midline
53.2
Periaquaductal grey, anterior nTPM: 68.3
2502
Female, age 75, unknown
75.5
1947
Male, age 18, unknown
67.3
1795
Male, age 51, unknown
62.0
Periaquaductal grey, dorsal nTPM: 60.5
1840
Male, age 53, unknown
62.0
2850
Male, age 76, both hemispheres
60.8
1831
Male, age 72, unknown
59.7
2464
Female, age 72, unknown
59.4
Periaquaductal grey, lateral nTPM: 62.8
2053
Male, age 18, unknown
73.9
2140
Male, age 76, both hemispheres
62.1
2272
Male, age 74, both hemispheres
52.3
Pretectal area nTPM: 65.7
1816
Male, age 51, unknown
77.4
1815
Male, age 53, unknown
77.3
1944
Female, age 72, unknown
70.1
2007
Male, age 72, unknown
68.5
2316
Male, age 76, right hemisphere
68.3
1817
Female, age 42, unknown
65.0
2825
Male, age 18, unknown
64.0
2224
Female, age 72, unknown
63.6
2407
Male, age 75, both hemispheres
63.0
2273
Male, age 74, both hemispheres
55.6
2667
Female, age 75, unknown
49.5
Red nucleus nTPM: 64.9
2503
Female, age 72, unknown
77.0
2588
Male, age 74, left hemisphere
71.2
1865
Male, age 51, unknown
69.3
1904
Male, age 53, unknown
68.3
1954
Female, age 42, unknown
66.3
2725
Female, age 75, unknown
64.1
1821
Female, age 72, unknown
64.0
2823
Male, age 76, right hemisphere
63.2
2584
Male, age 75, left hemisphere
61.8
2769
Male, age 72, unknown
58.5
2785
Male, age 18, unknown
58.2
2227
Male, age 72, unknown
56.5
Substantia nigra nTPM: 66.9
2665
Male, age 74, both hemispheres
83.9
2590
Female, age 75, unknown
73.4
2409
Female, age 72, unknown
72.1
2699
Male, age 18, unknown
69.5
1889
Female, age 72, unknown
66.9
2241
Male, age 72, unknown
66.7
2583
Male, age 75, right hemisphere
65.6
1851
Male, age 51, unknown
65.4
1916
Female, age 42, unknown
56.0
1941
Male, age 53, unknown
49.9
Superior colliculus nTPM: 68.8
2668
Female, age 75, unknown
74.3
2587
Male, age 74, left hemisphere
73.4
1995
Male, age 72, unknown
73.2
1796
Male, age 53, unknown
68.8
1913
Female, age 42, unknown
68.5
2261
Male, age 18, unknown
68.4
2087
Female, age 72, unknown
67.8
2664
Male, age 75, both hemispheres
67.7
1895
Male, age 76, right hemisphere
64.8
1839
Male, age 51, unknown
61.4
Ventral tegmental area nTPM: 60.5
2021
Male, age 53, unknown
67.3
2410
Female, age 72, unknown
62.2
1942
Male, age 51, unknown
61.7
1915
Female, age 42, unknown
60.7
2218
Male, age 76, both hemispheres
57.8
2223
Female, age 72, unknown
53.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
49.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 49.9
Samples: 139
Max nTPM: 113.2
Min nTPM: 17.3
Std nTPM: 20.3
Median nTPM: 44.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
113.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
106.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
102.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
95.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
94.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
93.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
90.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
89.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
88.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
86.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
85.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
85.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
79.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
78.1
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
77.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
76.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
76.5
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
74.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
74.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
74.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
73.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
72.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
71.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
70.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
70.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
69.9
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
68.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
68.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
68.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
67.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
67.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
67.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
66.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
66.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
65.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
62.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
62.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
61.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
60.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
60.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
59.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
58.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
58.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
56.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
55.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
54.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
54.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
54.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
53.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
53.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
53.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
52.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
51.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
50.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
50.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
50.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
49.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
48.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
48.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
48.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
48.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
47.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
46.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
46.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
45.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
45.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
45.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
45.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
45.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
44.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
44.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
44.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
43.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
43.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
42.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
42.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
41.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
41.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
41.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
40.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
40.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
40.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
40.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
39.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
39.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
39.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
39.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
38.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
38.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
38.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
38.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
38.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
36.5
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
36.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
36.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
35.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
35.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
35.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
35.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
35.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
34.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
34.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
34.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
34.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
33.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
33.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
33.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
33.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
32.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
32.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
32.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
32.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
31.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
30.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
30.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
30.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
30.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
30.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
30.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
30.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
29.7
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
29.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
29.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
28.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
28.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
28.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
28.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
27.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
27.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
27.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
26.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
26.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
26.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
26.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
26.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
25.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
23.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
17.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
17.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
42.5
Mouse sample
Sample description
nTPM
Midbrain nTPM: 42.5
Samples: 4
Max nTPM: 43.9
Min nTPM: 40.6
Sample A
Male
43.5
Sample B
Male
40.6
Sample C
Female
43.9
Sample D
Female
42.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.