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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

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  • CELL LINE

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  • EVOLUTION

  • HSPA8
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:633.6 nTPM
GTEx:478.3 nTPM
FANTOM5:1299.5 Scaled Tags Per Million
Pig:1204.5 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

633.6
Sample id Sample description nTPM
Putamen
nTPM: 633.6
2482 Female, age 94, left hemisphere 884.2
2466 Female, age 79, unknown 703.2
1937 Female, age 91, right hemisphere 689.8
1838 Male, age 80, right hemisphere 620.0
2647 Male, age 75, left hemisphere 574.1
1829 Male, age 74, unknown 565.1
2489 Female, age 72, unknown 398.9

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

478.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 478.3
Samples: 254

Max nTPM: 1797.4
Min nTPM: 193.5
Std nTPM: 183.1
Median nTPM: 447.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1797.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1291.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1113.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1077.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1009.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 991.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 968.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 892.0
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 871.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 869.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 833.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 825.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 788.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 788.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 783.5
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 781.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 779.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 767.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 757.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 744.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 714.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 708.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 704.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 699.8
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 696.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 690.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 689.2
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 684.8
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 680.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 656.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 653.3
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 647.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 645.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 640.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 637.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 631.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 628.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 624.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 615.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 614.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 614.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 612.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 604.0
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 589.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 588.9
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 581.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 580.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 579.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 576.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 572.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 570.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 567.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 563.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 558.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 547.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 544.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 543.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 543.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 540.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 533.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 530.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 530.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 529.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 526.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 522.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 519.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 515.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 513.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 513.6
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 512.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 511.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 510.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 508.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 501.6
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 501.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 499.0
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 499.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 497.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 497.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 496.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 496.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 494.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 493.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 492.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 491.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 491.7
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 490.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 490.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 489.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 489.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 489.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 487.6
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 483.5
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 482.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 479.8
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 476.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 475.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 474.9
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 474.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 473.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 472.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 470.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 467.7
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 465.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 464.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 461.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 461.1
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 461.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 460.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 460.1
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 460.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 459.8
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 457.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 457.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 454.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 453.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 453.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 453.0
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 452.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 452.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 452.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 452.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 451.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 451.7
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 450.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 449.2
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 449.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 445.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 439.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 439.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 439.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 438.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 435.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 434.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 434.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 428.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 428.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 428.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 428.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 426.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 423.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 423.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 422.9
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 422.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 422.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 422.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 422.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 421.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 421.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 419.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 419.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 418.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 416.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 414.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 412.6
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 412.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 411.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 411.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 410.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 409.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 408.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 408.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 408.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 407.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 406.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 405.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 404.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 401.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 401.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 400.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 398.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 396.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 395.5
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 393.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 390.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 390.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 389.9
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 389.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 388.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 388.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 385.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 385.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 382.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 381.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 379.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 378.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 373.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 373.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 371.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 371.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 369.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 369.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 368.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 367.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 367.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 363.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 363.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 363.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 362.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 359.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 359.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 358.1
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 354.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 354.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 353.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 347.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 346.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 345.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 345.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 344.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 343.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 343.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 341.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 340.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 339.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 338.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 336.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 336.3
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 336.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 333.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 332.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 331.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 326.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 316.2
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 315.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 314.4
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 314.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 312.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 308.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 304.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 303.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 302.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 297.2
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 295.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 289.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 287.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 287.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 281.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 275.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 274.0
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 269.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 263.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 260.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 260.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 259.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 252.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 252.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 247.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 246.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 229.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 220.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 211.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 209.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 193.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1299.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 1299.5
FF:10176-103C5 60 years, female 1299.5

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1204.5
Pig sample Sample description nTPM
Putamen
nTPM: 1204.5
Samples: 3

Max nTPM: 1572.4
Min nTPM: 953.2
Sample B Female 953.2
Sample C Male 1572.4
Sample D Male 1087.9

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