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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPS13
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN43 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX HIPPOCAMPAL FORMATION
HYPOTHALAMUS INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:248.2 nTPM
GTEx:642.7 nTPM
FANTOM5:125.9 Scaled Tags Per Million
Pig:179.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

248.2
Sample id Sample description nTPM
Putamen
nTPM: 248.2
2466 Female, age 79, unknown 324.1
1937 Female, age 91, right hemisphere 256.2
2482 Female, age 94, left hemisphere 253.8
1838 Male, age 80, right hemisphere 246.0
2647 Male, age 75, left hemisphere 235.7
1829 Male, age 74, unknown 231.7
2489 Female, age 72, unknown 190.2

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

642.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 642.7
Samples: 254

Max nTPM: 2006.0
Min nTPM: 333.5
Std nTPM: 196.7
Median nTPM: 611.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2006.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1305.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1295.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1191.2
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 1162.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 1090.8
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1063.7
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 1062.8
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1049.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1040.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1023.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1005.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 997.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 988.1
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 981.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 977.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 968.8
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 952.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 942.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 935.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 932.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 932.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 916.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 916.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 913.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 911.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 909.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 898.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 896.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 891.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 887.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 882.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 881.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 861.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 858.3
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 845.9
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 839.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 837.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 837.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 828.0
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 818.6
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 810.4
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 777.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 776.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 774.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 772.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 766.3
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 760.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 753.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 750.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 748.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 747.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 744.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 744.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 733.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 732.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 731.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 731.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 729.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 728.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 728.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 724.7
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 721.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 720.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 720.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 716.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 715.1
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 713.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 713.3
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 712.0
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 710.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 709.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 705.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 702.1
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 699.6
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 699.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 691.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 680.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 678.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 677.6
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 677.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 675.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 670.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 670.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 667.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 665.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 665.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 662.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 662.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 662.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 658.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 658.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 658.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 657.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 657.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 656.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 655.9
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 653.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 649.9
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 648.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 647.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 646.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 645.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 641.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 636.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 636.2
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 630.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 630.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 628.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 628.3
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 626.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 626.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 625.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 624.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 623.9
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 622.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 620.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 620.0
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 617.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 617.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 615.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 614.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 614.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 613.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 613.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 613.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 612.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 609.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 608.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 608.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 607.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 607.4
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 605.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 600.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 598.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 594.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 593.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 592.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 588.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 588.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 587.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 581.4
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 579.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 579.3
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 577.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 577.7
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 576.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 575.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 569.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 567.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 566.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 564.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 564.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 562.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 561.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 561.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 557.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 557.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 556.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 556.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 553.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 551.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 550.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 549.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 549.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 549.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 548.3
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 547.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 540.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 540.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 539.8
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 539.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 538.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 535.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 533.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 533.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 532.4
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 531.6
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 528.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 526.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 526.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 526.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 522.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 521.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 521.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 520.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 518.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 517.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 517.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 516.7
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 516.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 514.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 514.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 512.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 509.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 507.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 505.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 503.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 500.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 498.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 497.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 496.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 495.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 493.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 492.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 492.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 491.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 489.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 488.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 486.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 485.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 482.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 482.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 481.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 481.1
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 478.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 478.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 474.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 471.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 469.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 469.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 467.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 466.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 462.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 462.8
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 462.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 461.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 456.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 452.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 447.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 441.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 436.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 432.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 428.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 427.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 412.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 411.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 411.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 409.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 405.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 401.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 399.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 398.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 397.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 395.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 395.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 391.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 387.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 381.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 373.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 366.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 341.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 335.1
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 333.5
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

125.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 125.9
FF:10176-103C5 60 years, female 125.9

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

179.7
Pig sample Sample description nTPM
Putamen
nTPM: 179.7
Samples: 3

Max nTPM: 231.0
Min nTPM: 127.6
Sample B Female 127.6
Sample C Male 231.0
Sample D Male 180.5

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