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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
192.2
nTPM
Monaco:
444.3
nTPM
Schmiedel:
560.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
192.2
HPA sample
nTPM
gdT-cell nTPM: 131.2
Samples: 6
Max nTPM: 150.7
Min nTPM: 113.3
P10809_1007
113.3
P10809_1022
150.7
P10809_1041
123.1
P10809_1060
125.8
P10809_1077
149.1
P10809_1098
125.4
MAIT T-cell nTPM: 172.6
Samples: 6
Max nTPM: 209.3
Min nTPM: 119.1
P10809_1006
175.8
P10809_1024
170.4
P10809_1043
119.1
P10809_1062
170.9
P10809_1083
190.1
P10809_1097
209.3
Memory CD4 T-cell nTPM: 171.1
Samples: 6
Max nTPM: 187.2
Min nTPM: 137.6
P10809_1014
182.5
P10809_1026
137.6
P10809_1045
153.1
P10809_1064
187.2
P10809_1086
184.7
P10809_1113
181.6
Memory CD8 T-cell nTPM: 156.7
Samples: 5
Max nTPM: 177.5
Min nTPM: 130.2
P10809_1012
177.5
P10809_1027
158.4
P10809_1046
130.2
P10809_1065
148.2
P10809_1111
169.0
Naive CD4 T-cell nTPM: 167.8
Samples: 6
Max nTPM: 202.4
Min nTPM: 143.1
P10809_1015
202.4
P10809_1030
145.6
P10809_1049
143.1
P10809_1068
194.5
P10809_1085
167.5
P10809_1112
153.7
Naive CD8 T-cell nTPM: 148.2
Samples: 6
Max nTPM: 167.4
Min nTPM: 116.5
P10809_1016
167.4
P10809_1031
141.3
P10809_1050
116.5
P10809_1069
157.3
P10809_1087
155.0
P10809_1110
151.5
T-reg nTPM: 192.2
Samples: 6
Max nTPM: 237.8
Min nTPM: 153.7
P10809_1018
183.3
P10809_1037
203.8
P10809_1056
167.1
P10809_1075
153.7
P10809_1094
207.3
P10809_1106
237.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
444.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 330.5
Samples: 4
Max nTPM: 385.2
Min nTPM: 301.3
RHH5202_R3573
385.2
RHH5230_R3602
333.9
RHH5259_R3631
301.3
RHH5288_R3660
301.6
Effector memory CD8 T-cell nTPM: 353.8
Samples: 4
Max nTPM: 426.0
Min nTPM: 314.2
RHH5203_R3574
426.0
RHH5231_R3603
322.2
RHH5260_R3632
314.2
RHH5289_R3661
352.9
MAIT T-cell nTPM: 364.7
Samples: 4
Max nTPM: 411.8
Min nTPM: 325.5
RHH5233_R3605
335.1
RHH5205_R3576
386.4
RHH5262_R3634
411.8
RHH5297_R3663
325.5
Memory CD4 T-cell TFH nTPM: 393.3
Samples: 4
Max nTPM: 453.4
Min nTPM: 326.4
RHH5300_R3666
326.4
RHH5236_R3608
371.9
RHH5265_R3637
453.4
RHH5208_R3579
421.5
Memory CD4 T-cell Th1 nTPM: 343.8
Samples: 4
Max nTPM: 394.6
Min nTPM: 276.0
RHH5210_R3581
344.9
RHH5302_R3668
359.8
RHH5238_R3610
276.0
RHH5267_R3639
394.6
Memory CD4 T-cell Th1/Th17 nTPM: 365.1
Samples: 4
Max nTPM: 431.1
Min nTPM: 251.8
RHH5303_R3669
357.3
RHH5211_R3582
420.1
RHH5239_R3611
251.8
RHH5268_R3640
431.1
Memory CD4 T-cell Th17 nTPM: 392.7
Samples: 4
Max nTPM: 440.1
Min nTPM: 348.5
RHH5304_R3670
348.5
RHH5212_R3583
440.1
RHH5240_R3612
367.7
RHH5269_R3641
414.3
Memory CD4 T-cell Th2 nTPM: 444.4
Samples: 4
Max nTPM: 520.2
Min nTPM: 379.6
RHH5305_R3671
379.6
RHH5213_R3584
520.2
RHH5241_R3613
408.2
RHH5270_R3642
469.4
Naive CD4 T-cell nTPM: 341.1
Samples: 4
Max nTPM: 381.8
Min nTPM: 317.5
RHH5306_R3672
327.3
RHH5214_R3585
317.5
RHH5242_R3614
337.8
RHH5271_R3643
381.8
Naive CD8 T-cell nTPM: 341.6
Samples: 4
Max nTPM: 469.4
Min nTPM: 205.4
RHH5201_R3572
469.4
RHH5229_R3601
205.4
RHH5258_R3630
368.8
RHH5287_R3659
322.8
Non-Vd2 gdTCR nTPM: 326.2
Samples: 4
Max nTPM: 426.8
Min nTPM: 268.1
RHH5235_R3607
285.7
RHH5264_R3636
324.1
RHH5207_R3578
426.8
RHH5299_R3665
268.1
T-reg nTPM: 396.6
Samples: 4
Max nTPM: 449.7
Min nTPM: 341.8
RHH5301_R3667
341.8
RHH5237_R3609
400.7
RHH5266_R3638
449.7
RHH5209_R3580
394.1
Terminal effector memory CD4 T-cell nTPM: 359.4
Samples: 2
Max nTPM: 373.3
Min nTPM: 345.5
RHH5243_R3615
345.5
RHH5272_R3644
373.3
Terminal effector memory CD8 T-cell nTPM: 310.3
Samples: 4
Max nTPM: 326.3
Min nTPM: 288.2
RHH5232_R3604
318.3
RHH5204_R3575
308.2
RHH5261_R3633
326.3
RHH5296_R3662
288.2
Vd2 gdTCR nTPM: 316.1
Samples: 4
Max nTPM: 340.0
Min nTPM: 280.0
RHH5234_R3606
307.7
RHH5206_R3577
336.8
RHH5263_R3635
340.0
RHH5298_R3664
280.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.