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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
182.1
nTPM
HPA Brain:
180.9
nTPM
GTEx:
182.1
nTPM
FANTOM5:
555.7
Scaled Tags Per Million
Pig:
282.3
nTPM
Mouse:
99.1
nTPM
Allen mouse:
7.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
180.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 143.7
1870
Female, age 42, unknown
180.4
2411
Female, age 72, unknown
157.2
2019
Male, age 18, unknown
155.9
1833
Male, age 53, unknown
147.7
1830
Male, age 51, unknown
145.8
2586
Male, age 75, left hemisphere
133.9
1827
Male, age 72, unknown
132.6
2828
Female, age 72, unknown
128.4
2219
Male, age 76, both hemispheres
127.9
2666
Male, age 74, left hemisphere
127.4
Dorsal raphe nucleus nTPM: 162.4
2298
Female, age 72, unknown
173.7
2047
Male, age 72, unknown
167.0
2750
Male, age 76, both hemispheres
161.8
2016
Female, age 72, unknown
157.6
1828
Male, age 53, unknown
152.0
Inferior colliculus nTPM: 134.1
2097
Female, age 72, unknown
141.8
1848
Female, age 42, unknown
135.6
1890
Male, age 53, unknown
134.4
2849
Male, age 72, unknown
124.4
Median raphe nucleus nTPM: 180.9
2220
Male, age 76, midline
180.9
Periaquaductal grey, anterior nTPM: 145.6
1947
Male, age 18, unknown
156.9
2502
Female, age 75, unknown
149.9
1795
Male, age 51, unknown
129.9
Periaquaductal grey, dorsal nTPM: 145.2
2850
Male, age 76, both hemispheres
178.9
1840
Male, age 53, unknown
148.3
1831
Male, age 72, unknown
128.5
2464
Female, age 72, unknown
125.0
Periaquaductal grey, lateral nTPM: 150.7
2272
Male, age 74, both hemispheres
155.7
2140
Male, age 76, both hemispheres
155.6
2053
Male, age 18, unknown
140.7
Pretectal area nTPM: 146.2
2273
Male, age 74, both hemispheres
169.7
2224
Female, age 72, unknown
162.6
2667
Female, age 75, unknown
161.1
1817
Female, age 42, unknown
146.7
1815
Male, age 53, unknown
143.9
2825
Male, age 18, unknown
142.4
2007
Male, age 72, unknown
141.0
1816
Male, age 51, unknown
139.0
1944
Female, age 72, unknown
135.5
2407
Male, age 75, both hemispheres
134.4
2316
Male, age 76, right hemisphere
131.5
Red nucleus nTPM: 152.0
1821
Female, age 72, unknown
190.8
1865
Male, age 51, unknown
172.8
2725
Female, age 75, unknown
168.1
1904
Male, age 53, unknown
167.1
1954
Female, age 42, unknown
161.9
2785
Male, age 18, unknown
156.1
2503
Female, age 72, unknown
155.8
2769
Male, age 72, unknown
141.5
2227
Male, age 72, unknown
141.4
2823
Male, age 76, right hemisphere
137.9
2588
Male, age 74, left hemisphere
116.9
2584
Male, age 75, left hemisphere
114.0
Substantia nigra nTPM: 173.0
2241
Male, age 72, unknown
256.1
1916
Female, age 42, unknown
199.8
2409
Female, age 72, unknown
187.8
1851
Male, age 51, unknown
181.8
1941
Male, age 53, unknown
174.3
1889
Female, age 72, unknown
163.6
2699
Male, age 18, unknown
160.1
2665
Male, age 74, both hemispheres
146.2
2590
Female, age 75, unknown
131.0
2583
Male, age 75, right hemisphere
129.3
Superior colliculus nTPM: 137.9
2587
Male, age 74, left hemisphere
157.7
1913
Female, age 42, unknown
155.1
1895
Male, age 76, right hemisphere
143.7
2668
Female, age 75, unknown
139.4
1796
Male, age 53, unknown
136.6
1839
Male, age 51, unknown
134.7
1995
Male, age 72, unknown
133.9
2261
Male, age 18, unknown
130.1
2664
Male, age 75, both hemispheres
124.8
2087
Female, age 72, unknown
122.6
Ventral tegmental area nTPM: 159.8
2223
Female, age 72, unknown
175.8
1915
Female, age 42, unknown
174.8
2410
Female, age 72, unknown
158.4
2218
Male, age 76, both hemispheres
156.6
1942
Male, age 51, unknown
151.5
2021
Male, age 53, unknown
141.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
182.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 182.1
Samples: 139
Max nTPM: 611.1
Min nTPM: 109.6
Std nTPM: 72.9
Median nTPM: 166.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
611.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
536.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
509.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
484.2
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
318.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
307.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
285.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
268.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
262.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
258.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
258.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
245.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
241.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
239.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
235.4
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
235.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
228.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
224.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
224.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
222.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
221.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
220.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
211.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
211.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
209.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
206.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
202.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
201.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
201.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
201.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
198.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
196.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
195.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
192.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
192.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
192.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
191.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
191.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
189.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
188.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
187.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
186.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
186.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
185.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
183.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
183.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
182.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
181.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
181.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
180.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
179.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
179.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
178.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
177.8
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
177.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
177.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
177.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
177.5
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
174.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
174.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
172.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
171.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
171.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
171.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
170.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
169.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
168.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
168.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
167.2
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
166.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
166.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
166.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
166.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
161.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
160.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
160.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
159.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
158.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
158.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
158.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
158.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
157.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
157.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
157.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
155.1
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
154.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
154.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
153.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
151.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
151.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
150.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
150.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
150.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
148.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
148.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
148.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
147.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
146.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
146.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
145.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
145.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
144.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
144.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
143.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
142.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
142.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
141.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
141.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
141.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
141.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
139.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
138.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
136.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
136.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
135.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
135.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
133.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
131.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
131.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
131.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
131.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
130.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
129.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
129.2
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
129.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
128.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
128.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
127.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
125.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
125.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
123.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
122.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
121.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
121.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
119.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
118.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
116.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
115.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
109.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
99.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 99.1
Samples: 4
Max nTPM: 102.0
Min nTPM: 96.9
Sample A
Male
99.7
Sample B
Male
102.0
Sample C
Female
97.8
Sample D
Female
96.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.