HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:183.3 nTPM
HPA Brain:85.9 nTPM
GTEx:183.3 nTPM
FANTOM5:235.2 Scaled Tags Per Million
Pig:163.2 nTPM
Mouse:411.1 nTPM
Allen mouse:19.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006550
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 85.9
Sample id Sample description nTPM
Hippocampus
nTPM: 82.1
1898 Male, age 80, left hemisphere 97.4
1855 Male, age 76, left hemisphere 95.4
1911 Female, age 85, right hemisphere 81.2
2621 Female, age 67, right hemisphere 79.5
2529 Female, age 94, left hemisphere 78.2
2148 Female, age 91, left hemisphere 60.8
Dentate gyrus
nTPM: 77.1
2010 Male, age 76, both hemispheres 100.8
1927 Female, age 91, both hemispheres 86.8
2246 Female, age 85, both hemispheres 86.0
2530 Female, age 94, left hemisphere 70.1
2531 Female, age 67, both hemispheres 60.9
2528 Male, age 74, both hemispheres 57.9
Entorhinal gyrus
nTPM: 61.4
1938 Female, age 85, left hemisphere 81.5
1787 Male, age 76, left hemisphere 71.3
2117 Female, age 91, right hemisphere 63.1
2764 Male, age 80, right hemisphere 60.6
2613 Female, age 94, left hemisphere 47.7
2686 Male, age 75, right hemisphere 44.5
Hippocampus, CA1
nTPM: 85.9
2749 Male, age 80, left hemisphere 108.2
1873 Female, age 85, both hemispheres 97.5
2045 Male, age 76, both hemispheres 86.0
2527 Male, age 74, both hemispheres 72.6
2082 Female, age 91, right hemisphere 65.2
Hippocampus, CA2
nTPM: 78.5
1892 Male, age 76, both hemispheres 95.8
1940 Female, age 85, left hemisphere 85.1
2249 Male, age 74, both hemispheres 79.6
1963 Male, age 80, left hemisphere 74.1
2437 Female, age 94, left hemisphere 72.3
2113 Female, age 91, right hemisphere 64.3
Hippocampus, CA3
nTPM: 74.6
1867 Male, age 76, both hemispheres 97.3
2137 Male, age 80, left hemisphere 84.3
2436 Male, age 74, both hemispheres 81.0
1891 Female, age 85, both hemispheres 75.3
2861 Female, age 67, both hemispheres 61.2
2620 Female, age 94, left hemisphere 48.8
Parahippocampal cortex
nTPM: 72.3
2018 Male, age 76, both hemispheres 98.5
2250 Female, age 67, right hemisphere 83.1
1933 Female, age 85, both hemispheres 82.4
2245 Female, age 91, both hemispheres 80.8
1850 Male, age 80, both hemispheres 75.2
2693 Female, age 94, both hemispheres 69.4
1990 Female, age 91, right hemisphere 68.5
2532 Female, age 72, left hemisphere 65.5
2692 Male, age 74, both hemispheres 51.9
2622 Female, age 67, right hemisphere 47.4
Perirhinal gyrus
nTPM: 82.2
1847 Female, age 91, left hemisphere 96.8
1841 Female, age 85, right hemisphere 84.7
2521 Female, age 94, right hemisphere 84.3
1794 Male, age 80, right hemisphere 78.2
2848 Male, age 76, right hemisphere 67.2
Subiculum
nTPM: 75.8
2438 Female, age 94, left hemisphere 94.8
2042 Male, age 76, both hemispheres 82.4
1977 Female, age 85, both hemispheres 79.7
1901 Male, age 80, both hemispheres 79.0
2729 Female, age 91, right hemisphere 64.3
2619 Male, age 74, both hemispheres 54.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 183.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 183.3
Samples: 255

Max nTPM: 322.5
Min nTPM: 105.8
Std nTPM: 38.4
Median nTPM: 177.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 322.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 319.5
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 302.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 280.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 278.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 276.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 275.9
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 275.3
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 272.9
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 272.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 268.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 235.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 235.2
FF:10169-103B7 60 years, female 298.0
FF:10153-102I9 76 years, female 172.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 163.2
Pig sample Sample description nTPM
Subiculum
nTPM: 115.5
Samples: 4

Max nTPM: 147.0
Min nTPM: 100.4
Sample A Female 147.0
Sample B Female 103.3
Sample C Male 100.4
Sample D Male 111.1
Dorsal hippocampus
nTPM: 163.2
Samples: 4

Max nTPM: 211.3
Min nTPM: 129.3
Sample A Female 211.3
Sample B Female 166.2
Sample C Male 146.0
Sample D Male 129.3
Entorhinal cortex
nTPM: 123.4
Samples: 4

Max nTPM: 146.9
Min nTPM: 96.0
Sample A Female 140.6
Sample B Female 146.9
Sample C Male 109.9
Sample D Male 96.0
Ventral hippocampus
nTPM: 140.8
Samples: 4

Max nTPM: 168.8
Min nTPM: 102.6
Sample A Female 163.9
Sample B Female 102.6
Sample C Male 127.7
Sample D Male 168.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 411.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 321.5
Samples: 4

Max nTPM: 343.7
Min nTPM: 289.8
Sample A Male 289.8
Sample B Male 333.4
Sample C Female 343.7
Sample D Female 319.0
Hippocampal formation
nTPM: 411.1
Samples: 4

Max nTPM: 456.8
Min nTPM: 374.6
Sample A Male 427.8
Sample B Male 374.6
Sample C Female 456.8
Sample D Female 385.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 19.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.7
68193057 Antisense, RP_040826_01_F03, Mouse strain C57BL/6J (56 days, male) 19.7

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