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  • TISSUE

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  • ALDH2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:76.4 nTPM
HPA Brain:114.3 nTPM
GTEx:76.4 nTPM
Pig:27.1 nTPM
Mouse:125.6 nTPM
Allen mouse:2.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 81.4
1961 Female, age 42, unknown 95.4
2226 Male, age 75, left hemisphere 67.5
Dorsomedial nucleus
nTPM: 103.5
1989 Male, age 62, unknown 144.7
2017 Female, age 42, unknown 83.0
2041 Female, age 72, unknown 82.9
Lateral hypothalamic area
nTPM: 76.0
1791 Male, age 80, right hemisphere 105.7
2412 Male, age 62, unknown 75.5
2271 Male, age 75, both hemispheres 70.0
2228 Male, age 66, unknown 52.8
Mammillary body
nTPM: 88.7
1945 Male, age 80, right hemisphere 102.2
1834 Female, age 42, unknown 96.2
2413 Male, age 66, unknown 86.3
1923 Female, age 72, unknown 86.0
1948 Female, age 72, unknown 72.8
Paraventricular nucleus
nTPM: 72.8
2700 Male, age 62, unknown 72.8
Preoptic area
nTPM: 89.2
1861 Female, age 42, unknown 103.4
2414 Female, age 72, unknown 90.1
1907 Male, age 80, right hemisphere 74.0
Supraoptic nucleus
nTPM: 114.3
2043 Male, age 62, unknown 131.2
1894 Female, age 72, unknown 122.9
2835 Female, age 72, unknown 88.7
Ventromedial nucleus
nTPM: 84.6
1982 Female, age 72, unknown 92.6
1822 Female, age 42, unknown 76.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 76.4
Samples: 257

Max nTPM: 253.2
Min nTPM: 32.2
Std nTPM: 29.4
Median nTPM: 72.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 253.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 191.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 185.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 168.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 167.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 158.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 143.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 143.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 138.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 136.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 135.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 133.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 132.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 130.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 129.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 128.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 126.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 125.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 123.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 119.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 118.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 117.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 117.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 114.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 112.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 111.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 109.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 108.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 108.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 106.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 106.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 104.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 102.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 102.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 101.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 100.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 99.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 99.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 99.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 98.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 98.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 97.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 96.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 95.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 94.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 94.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 94.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 93.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 93.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 93.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 93.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 93.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 93.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 92.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 92.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 92.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 92.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 91.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 91.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 91.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 90.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 90.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 89.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 88.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 88.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 88.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 88.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 88.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 87.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 87.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 87.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 86.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 86.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 85.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 84.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 84.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 84.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 84.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 84.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 83.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 83.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 83.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 83.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 83.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 83.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 82.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 82.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 81.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 81.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 81.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 81.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 81.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 80.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 80.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 80.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 79.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 79.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 79.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 79.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 79.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 78.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 78.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 78.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 78.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 77.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 77.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 77.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 77.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 76.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 76.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 75.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 75.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 75.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 75.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 75.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 75.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 74.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 74.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 73.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 73.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 73.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 73.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 73.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 72.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 72.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 72.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 72.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 72.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 72.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 72.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 71.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 71.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 71.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 71.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 70.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 70.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 70.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 70.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 69.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 69.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 69.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 69.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 69.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 69.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 69.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 69.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 68.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 68.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 67.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 67.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 67.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 67.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 66.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 66.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 66.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 65.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 65.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 65.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 65.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 64.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 64.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 64.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 64.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 63.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 63.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 63.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 63.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 62.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 62.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 62.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 61.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 61.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 61.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 61.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 60.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 60.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 60.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 60.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 59.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 59.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 59.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 59.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 58.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 58.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 57.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 57.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 57.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 57.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 56.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 56.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 56.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 55.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 55.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 55.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 55.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 54.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 54.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 54.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 54.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 54.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 54.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 54.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 54.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 53.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 53.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 53.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 53.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 53.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 52.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 52.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 52.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 52.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 52.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 51.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 51.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 50.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 50.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 49.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 49.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 49.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 49.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 49.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 48.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 48.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 48.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 48.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 47.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 47.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 46.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 46.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 46.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 46.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 43.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 43.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 43.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 43.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 43.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 43.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 42.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 42.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 41.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 41.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 39.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 39.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 39.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 39.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 38.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 38.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 37.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 36.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 36.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 35.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 35.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 34.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 34.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 33.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 32.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 27.1
Samples: 4

Max nTPM: 33.3
Min nTPM: 23.4
Sample A Female 33.3
Sample B Female 26.1
Sample C Male 25.6
Sample D Male 23.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 125.6
Samples: 4

Max nTPM: 130.7
Min nTPM: 123.7
Sample A Male 130.7
Sample B Male 124.2
Sample C Female 123.8
Sample D Female 123.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.6
81655578 Antisense, RP_090413_01_C03, Mouse strain C57BL/6J (56 days, male) 3.6
74819240 Antisense, RP_060315_02_C04, Mouse strain C57BL/6J (56 days, male) 1.5

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