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  • TISSUE

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  • ATN1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:88.7 nTPM
HPA Brain:227.9 nTPM
GTEx:88.7 nTPM
Pig:109.3 nTPM
Mouse:45.1 nTPM
Allen mouse:11.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

227.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 180.5
1961 Female, age 42, unknown 194.8
2226 Male, age 75, left hemisphere 166.2
Dorsomedial nucleus
nTPM: 179.3
1989 Male, age 62, unknown 193.5
2017 Female, age 42, unknown 179.0
2041 Female, age 72, unknown 165.4
Lateral hypothalamic area
nTPM: 151.8
2412 Male, age 62, unknown 178.4
1791 Male, age 80, right hemisphere 150.8
2271 Male, age 75, both hemispheres 144.1
2228 Male, age 66, unknown 133.8
Mammillary body
nTPM: 156.4
1834 Female, age 42, unknown 182.9
2413 Male, age 66, unknown 160.2
1948 Female, age 72, unknown 159.2
1945 Male, age 80, right hemisphere 150.8
1923 Female, age 72, unknown 129.0
Paraventricular nucleus
nTPM: 227.9
2700 Male, age 62, unknown 227.9
Preoptic area
nTPM: 169.3
1861 Female, age 42, unknown 191.6
2414 Female, age 72, unknown 167.1
1907 Male, age 80, right hemisphere 149.2
Supraoptic nucleus
nTPM: 165.1
2835 Female, age 72, unknown 221.4
2043 Male, age 62, unknown 146.0
1894 Female, age 72, unknown 127.9
Ventromedial nucleus
nTPM: 182.4
1822 Female, age 42, unknown 194.0
1982 Female, age 72, unknown 170.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 88.7
Samples: 257

Max nTPM: 180.6
Min nTPM: 49.1
Std nTPM: 17.6
Median nTPM: 88.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 180.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 154.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 125.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 125.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 124.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 124.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 122.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 121.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 120.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 120.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 119.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 119.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 119.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 118.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 117.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 116.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 114.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 114.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 114.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 112.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 112.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 111.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 111.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 111.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 110.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 110.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 109.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 109.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 109.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 108.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 108.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 107.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 107.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 107.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 106.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 106.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 106.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 105.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 105.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 105.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 105.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 105.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 105.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 104.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 104.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 104.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 104.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 103.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 103.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 103.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 103.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 103.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 102.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 101.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 101.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 101.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 100.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 100.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 100.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 100.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 100.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 100.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 100.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 99.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 99.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 98.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 98.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 98.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 98.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 97.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 97.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 97.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 97.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 96.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 96.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 96.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 96.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 96.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 96.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 96.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 96.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 95.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 95.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 95.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 95.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 94.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 94.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 94.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 94.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 94.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 94.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 93.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 93.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 93.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 93.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 93.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 93.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 93.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 93.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 92.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 92.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 92.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 92.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 92.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 92.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 92.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 92.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 92.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 92.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 91.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 91.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 91.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 91.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 91.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 91.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 90.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 90.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 90.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 90.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 90.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 90.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 90.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 90.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 89.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 89.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 89.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 89.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 89.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 88.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 88.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 88.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 88.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 87.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 87.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 87.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 87.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 87.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 86.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 86.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 86.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 86.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 86.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 85.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 85.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 85.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 85.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 85.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 85.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 85.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 85.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 84.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 84.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 84.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 84.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 83.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 83.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 83.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 83.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 83.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 82.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 82.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 82.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 82.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 82.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 82.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 82.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 81.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 81.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 81.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 81.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 81.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 80.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 80.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 80.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 80.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 80.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 79.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 79.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 79.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 79.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 79.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 79.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 79.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 78.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 78.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 78.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 78.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 78.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 77.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 76.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 76.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 76.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 76.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 76.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 76.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 76.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 76.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 75.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 75.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 75.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 74.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 74.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 73.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 73.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 73.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 73.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 72.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 72.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 71.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 71.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 71.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 71.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 71.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 71.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 71.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 71.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 71.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 70.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 70.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 70.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 70.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 69.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 69.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 69.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 68.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 68.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 68.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 68.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 68.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 68.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 68.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 67.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 67.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 67.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 67.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 66.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 65.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 65.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 65.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 65.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 64.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 64.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 63.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 63.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 62.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 60.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 60.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 59.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 58.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 57.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 57.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 54.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 52.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 52.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 52.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 49.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 49.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 109.4
Samples: 4

Max nTPM: 126.9
Min nTPM: 96.7
Sample A Female 126.9
Sample B Female 103.2
Sample C Male 110.6
Sample D Male 96.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 45.1
Samples: 4

Max nTPM: 50.8
Min nTPM: 38.6
Sample A Male 49.8
Sample B Male 50.8
Sample C Female 38.6
Sample D Female 41.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.3
68911027 Antisense, RP_050203_02_G07, Mouse strain C57BL/6J (56 days, male) 11.3

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