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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPS12
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:298.1 nTPM
GTEx:1368.3 nTPM
FANTOM5:358.4 Scaled Tags Per Million
Macaque:216.6 nTPM
Pig:361.7 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

298.1
Sample id Sample description nTPM
Putamen
nTPM: 298.1
2466 Female, age 79, unknown 377.5
2482 Female, age 94, left hemisphere 301.0
1937 Female, age 91, right hemisphere 292.1
1838 Male, age 80, right hemisphere 286.5
2647 Male, age 75, left hemisphere 283.6
1829 Male, age 74, unknown 278.9
2489 Female, age 72, unknown 267.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1368.3
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1368.3
Samples: 254

Max nTPM: 4733.7
Min nTPM: 610.0
Std nTPM: 525.2
Median nTPM: 1270.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 4733.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 3604.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 3111.7
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 2898.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2887.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2840.9
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 2829.3
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 2612.0
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 2597.3
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 2572.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2544.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 2478.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 2444.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2428.9
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 2414.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2242.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 2157.2
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 2143.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 2138.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 2117.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 2053.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 2029.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 2026.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 2022.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1993.9
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1989.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1983.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1964.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1948.1
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1934.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1883.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1880.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1873.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1860.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1850.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1849.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1839.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1838.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1830.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1824.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1809.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1801.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1762.4
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1734.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1731.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1731.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1731.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1713.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1698.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1683.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1682.3
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 1680.2
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1678.7
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1671.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1651.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1644.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1633.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1627.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1626.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1617.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1611.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1610.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1567.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1546.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1536.9
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1518.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1514.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1508.6
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1496.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1478.9
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1474.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1473.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1468.8
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1466.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1464.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1454.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1452.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1439.3
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 1434.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1433.1
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1422.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1420.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1419.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1419.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1417.4
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 1415.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1394.8
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1391.5
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1391.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1390.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1380.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1379.5
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1376.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1374.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1374.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1366.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1363.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1358.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1350.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1343.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1330.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1330.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 1325.4
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 1323.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1318.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1315.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1315.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1313.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1313.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1308.8
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1306.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1304.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1303.1
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 1301.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1300.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1299.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1297.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1293.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1290.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1286.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1285.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1285.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1280.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1276.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1272.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1272.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1270.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1270.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1267.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1254.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1238.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1237.1
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 1237.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1235.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1234.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1233.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1207.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 1205.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1205.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1204.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 1191.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1186.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1184.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1181.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1181.4
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 1181.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1174.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1166.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1165.6
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 1163.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1162.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 1157.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1154.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1150.5
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 1141.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1141.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1139.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 1136.6
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 1131.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1123.6
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 1122.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1119.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1118.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1117.7
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 1116.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1110.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1106.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1103.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 1103.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1103.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1100.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1097.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1092.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1086.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1086.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1079.2
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 1076.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1068.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1066.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1066.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1055.2
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1051.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1043.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1038.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1037.7
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 1037.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1036.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1035.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1035.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1032.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1032.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 1030.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1029.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1029.0
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 1025.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1024.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 1023.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1023.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 1023.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 1019.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1012.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1010.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1004.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1001.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 994.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 986.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 979.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 978.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 972.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 968.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 966.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 961.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 958.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 951.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 947.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 946.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 934.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 934.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 932.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 917.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 910.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 903.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 901.4
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 898.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 895.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 894.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 890.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 878.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 877.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 869.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 861.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 859.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 856.3
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 829.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 827.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 813.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 808.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 806.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 799.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 799.7
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 798.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 792.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 771.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 764.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 763.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 748.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 748.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 710.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 700.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 692.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 690.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 690.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 674.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 610.0
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

358.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 358.4
FF:10176-103C5 60 years, female 358.4

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

216.6
Macaque sample Sample description nTPM
Putamen
nTPM: 216.6
Samples: 2

Max nTPM: 233.7
Min nTPM: 199.5
Sample A 199.5
Sample B 233.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

361.7
Pig sample Sample description nTPM
Putamen
nTPM: 361.7
Samples: 3

Max nTPM: 419.8
Min nTPM: 297.1
Sample B Female 297.1
Sample C Male 419.8
Sample D Male 368.2

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