A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
128.5
nTPM
Monaco:
107.8
nTPM
Schmiedel:
63.1
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
128.5
HPA sample
nTPM
Classical monocyte nTPM: 128.5
Samples: 6
Max nTPM: 159.3
Min nTPM: 107.9
P10809_1003
110.9
P10809_1020
124.9
P10809_1039
144.8
P10809_1058
107.9
P10809_1080
123.3
P10809_1107
159.3
Intermediate monocyte nTPM: 116.6
Samples: 6
Max nTPM: 164.8
Min nTPM: 78.8
P10809_1004
80.6
P10809_1023
118.2
P10809_1042
156.8
P10809_1061
78.8
P10809_1081
100.1
P10809_1108
164.8
Non-classical monocyte nTPM: 126.2
Samples: 5
Max nTPM: 201.5
Min nTPM: 65.0
P10809_1005
111.0
P10809_1053
136.8
P10809_1072
65.0
P10809_1082
116.7
P10809_1109
201.5
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
107.8
Monaco sample
nTPM
Classical monocyte nTPM: 103.1
Samples: 4
Max nTPM: 114.7
Min nTPM: 90.1
RHH5313_R3680
98.6
RHH5221_R3593
90.1
RHH5250_R3622
114.7
RHH5279_R3651
109.0
Intermediate monocyte nTPM: 107.8
Samples: 4
Max nTPM: 144.8
Min nTPM: 76.1
RHH5314_R3681
144.8
RHH5222_R3594
76.1
RHH5251_R3623
116.3
RHH5280_R3652
93.9
Non-classical monocyte nTPM: 85.1
Samples: 4
Max nTPM: 100.8
Min nTPM: 75.8
RHH5315_R3682
85.3
RHH5223_R3595
75.8
RHH5252_R3624
100.8
RHH5281_R3653
78.5
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
63.1
Schmiedel sample id
TPM
Classical monocyte TPM: 63.1
Samples: 91
Max TPM: 76.1
Min TPM: 52.4
MONOCYTES_1
76.1
MONOCYTES_2
73.0
MONOCYTES_3
72.8
MONOCYTES_4
72.8
MONOCYTES_5
71.2
MONOCYTES_6
70.6
MONOCYTES_7
70.5
MONOCYTES_8
70.3
MONOCYTES_9
70.3
MONOCYTES_10
70.3
MONOCYTES_11
69.8
MONOCYTES_12
69.2
MONOCYTES_13
68.7
MONOCYTES_14
68.6
MONOCYTES_15
68.4
MONOCYTES_16
68.3
MONOCYTES_17
68.0
MONOCYTES_18
67.9
MONOCYTES_19
67.5
MONOCYTES_20
67.3
MONOCYTES_21
66.7
MONOCYTES_22
66.1
MONOCYTES_23
65.9
MONOCYTES_24
65.9
MONOCYTES_25
65.8
MONOCYTES_26
65.7
MONOCYTES_27
65.6
MONOCYTES_28
65.6
MONOCYTES_29
65.5
MONOCYTES_30
65.4
MONOCYTES_31
65.2
MONOCYTES_32
65.0
MONOCYTES_33
65.0
MONOCYTES_34
64.8
MONOCYTES_35
64.5
MONOCYTES_36
64.5
MONOCYTES_37
64.4
MONOCYTES_38
64.4
MONOCYTES_39
64.2
MONOCYTES_40
64.2
MONOCYTES_41
64.2
MONOCYTES_42
64.0
MONOCYTES_43
64.0
MONOCYTES_44
63.7
MONOCYTES_45
63.4
MONOCYTES_46
63.4
MONOCYTES_47
63.4
MONOCYTES_48
63.2
MONOCYTES_49
62.7
MONOCYTES_50
62.4
MONOCYTES_51
62.3
MONOCYTES_52
62.0
MONOCYTES_53
61.8
MONOCYTES_54
61.8
MONOCYTES_55
61.5
MONOCYTES_56
61.3
MONOCYTES_57
61.3
MONOCYTES_58
61.1
MONOCYTES_59
61.0
MONOCYTES_60
60.6
MONOCYTES_61
60.2
MONOCYTES_62
60.1
MONOCYTES_63
60.1
MONOCYTES_64
59.5
MONOCYTES_65
59.4
MONOCYTES_66
59.4
MONOCYTES_67
59.2
MONOCYTES_68
59.1
MONOCYTES_69
59.0
MONOCYTES_70
58.6
MONOCYTES_71
58.6
MONOCYTES_72
58.5
MONOCYTES_73
58.3
MONOCYTES_74
58.1
MONOCYTES_75
57.9
MONOCYTES_76
57.8
MONOCYTES_77
57.6
MONOCYTES_78
57.6
MONOCYTES_79
57.5
MONOCYTES_80
57.4
MONOCYTES_81
57.1
MONOCYTES_82
57.0
MONOCYTES_83
56.9
MONOCYTES_84
56.7
MONOCYTES_85
56.6
MONOCYTES_86
56.6
MONOCYTES_87
56.1
MONOCYTES_88
55.7
MONOCYTES_89
55.0
MONOCYTES_90
53.7
MONOCYTES_91
52.4
Show allShow less
Non-classical monocyte TPM: 58.1
Samples: 90
Max TPM: 71.5
Min TPM: 45.4
M2_1
71.5
M2_2
71.1
M2_3
70.7
M2_4
69.6
M2_5
67.5
M2_6
66.8
M2_7
66.3
M2_8
64.4
M2_9
64.1
M2_10
64.0
M2_11
64.0
M2_12
64.0
M2_13
63.9
M2_14
63.4
M2_15
62.8
M2_16
62.7
M2_17
61.8
M2_18
61.8
M2_19
61.6
M2_20
61.6
M2_21
61.6
M2_22
61.5
M2_23
61.5
M2_24
61.3
M2_25
61.3
M2_26
61.2
M2_27
61.1
M2_28
60.7
M2_29
60.6
M2_30
60.6
M2_31
60.4
M2_32
60.4
M2_33
60.2
M2_34
60.0
M2_35
59.8
M2_36
59.6
M2_37
59.2
M2_38
58.9
M2_39
58.3
M2_40
57.8
M2_41
57.5
M2_42
57.4
M2_43
57.3
M2_44
57.2
M2_45
57.2
M2_46
57.1
M2_47
57.1
M2_48
57.1
M2_49
57.0
M2_50
56.9
M2_51
56.8
M2_52
56.7
M2_53
56.5
M2_54
56.5
M2_55
56.1
M2_56
56.0
M2_57
56.0
M2_58
55.9
M2_59
55.8
M2_60
55.7
M2_61
55.7
M2_62
55.5
M2_63
55.4
M2_64
55.4
M2_65
55.3
M2_66
55.2
M2_67
55.1
M2_68
55.1
M2_69
55.0
M2_70
54.8
M2_71
54.7
M2_72
54.3
M2_73
54.3
M2_74
53.9
M2_75
53.8
M2_76
53.8
M2_77
53.5
M2_78
53.2
M2_79
53.0
M2_80
52.0
M2_81
51.4
M2_82
51.2
M2_83
51.2
M2_84
50.6
M2_85
50.6
M2_86
50.5
M2_87
50.0
M2_88
49.7
M2_89
46.2
M2_90
45.4
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
