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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
992.4
nTPM
HPA Brain:
312.5
nTPM
GTEx:
992.4
nTPM
FANTOM5:
101.2
Scaled Tags Per Million
Pig:
447.4
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
312.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 282.1
1870
Female, age 42, unknown
312.6
2666
Male, age 74, left hemisphere
305.8
1827
Male, age 72, unknown
302.4
2411
Female, age 72, unknown
302.3
2828
Female, age 72, unknown
282.9
1833
Male, age 53, unknown
276.9
2019
Male, age 18, unknown
267.4
1830
Male, age 51, unknown
264.3
2586
Male, age 75, left hemisphere
262.5
2219
Male, age 76, both hemispheres
243.4
Dorsal raphe nucleus nTPM: 286.2
2298
Female, age 72, unknown
318.8
2750
Male, age 76, both hemispheres
284.4
1828
Male, age 53, unknown
283.1
2016
Female, age 72, unknown
281.5
2047
Male, age 72, unknown
263.1
Inferior colliculus nTPM: 302.4
2849
Male, age 72, unknown
322.7
1890
Male, age 53, unknown
310.8
2097
Female, age 72, unknown
293.6
1848
Female, age 42, unknown
282.3
Median raphe nucleus nTPM: 278.5
2220
Male, age 76, midline
278.5
Periaquaductal grey, anterior nTPM: 284.3
2502
Female, age 75, unknown
323.7
1795
Male, age 51, unknown
265.8
1947
Male, age 18, unknown
263.3
Periaquaductal grey, dorsal nTPM: 285.6
1840
Male, age 53, unknown
334.1
2850
Male, age 76, both hemispheres
282.3
1831
Male, age 72, unknown
281.8
2464
Female, age 72, unknown
244.5
Periaquaductal grey, lateral nTPM: 257.0
2053
Male, age 18, unknown
301.7
2140
Male, age 76, both hemispheres
256.8
2272
Male, age 74, both hemispheres
212.7
Pretectal area nTPM: 272.8
2224
Female, age 72, unknown
286.3
1817
Female, age 42, unknown
286.1
1815
Male, age 53, unknown
284.5
2825
Male, age 18, unknown
280.7
1816
Male, age 51, unknown
278.3
2007
Male, age 72, unknown
277.8
2316
Male, age 76, right hemisphere
274.9
1944
Female, age 72, unknown
273.4
2407
Male, age 75, both hemispheres
270.9
2667
Female, age 75, unknown
258.7
2273
Male, age 74, both hemispheres
229.4
Red nucleus nTPM: 289.9
2725
Female, age 75, unknown
335.0
1821
Female, age 72, unknown
333.3
2503
Female, age 72, unknown
317.9
2584
Male, age 75, left hemisphere
312.4
1865
Male, age 51, unknown
300.4
2769
Male, age 72, unknown
286.7
2588
Male, age 74, left hemisphere
281.4
1904
Male, age 53, unknown
273.7
2227
Male, age 72, unknown
266.0
1954
Female, age 42, unknown
260.5
2785
Male, age 18, unknown
257.8
2823
Male, age 76, right hemisphere
253.5
Substantia nigra nTPM: 312.5
2665
Male, age 74, both hemispheres
371.7
2699
Male, age 18, unknown
355.4
2409
Female, age 72, unknown
348.1
1851
Male, age 51, unknown
345.7
2241
Male, age 72, unknown
321.5
1916
Female, age 42, unknown
313.6
1889
Female, age 72, unknown
309.8
1941
Male, age 53, unknown
274.5
2590
Female, age 75, unknown
244.9
2583
Male, age 75, right hemisphere
239.5
Superior colliculus nTPM: 288.2
2587
Male, age 74, left hemisphere
370.1
1895
Male, age 76, right hemisphere
303.4
1913
Female, age 42, unknown
291.5
1839
Male, age 51, unknown
290.6
2668
Female, age 75, unknown
286.8
1796
Male, age 53, unknown
282.3
1995
Male, age 72, unknown
280.8
2664
Male, age 75, both hemispheres
267.1
2261
Male, age 18, unknown
258.3
2087
Female, age 72, unknown
250.9
Ventral tegmental area nTPM: 285.4
1915
Female, age 42, unknown
340.6
2223
Female, age 72, unknown
286.6
2410
Female, age 72, unknown
280.6
2021
Male, age 53, unknown
277.6
1942
Male, age 51, unknown
267.0
2218
Male, age 76, both hemispheres
260.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
992.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 992.4
Samples: 139
Max nTPM: 3558.6
Min nTPM: 419.6
Std nTPM: 414.3
Median nTPM: 899.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
3558.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
2372.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
2358.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
2142.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
2074.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
2039.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
1960.3
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
1617.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
1591.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
1573.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1476.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1456.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
1445.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
1400.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
1384.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
1338.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
1313.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
1303.2
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
1283.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
1269.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
1253.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
1251.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
1229.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
1201.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1191.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
1191.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1190.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
1184.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
1162.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
1155.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
1145.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1135.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
1132.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
1129.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
1121.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
1118.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
1115.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
1112.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
1111.2
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
1111.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
1104.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
1102.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
1088.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
1087.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
1048.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1042.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
1041.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
1030.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
1030.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
1015.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
1015.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
1002.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
997.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
980.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
980.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
979.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
975.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
971.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
968.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
962.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
958.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
954.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
952.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
941.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
938.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
935.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
927.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
918.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
903.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
899.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
898.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
879.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
877.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
875.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
871.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
865.9
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
864.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
862.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
854.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
849.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
833.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
833.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
825.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
824.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
820.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
802.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
801.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
798.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
793.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
793.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
785.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
782.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
775.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
774.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
773.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
767.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
763.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
763.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
762.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
754.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
751.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
748.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
745.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
740.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
732.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
730.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
730.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
728.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
717.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
716.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
716.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
714.5
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
713.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
697.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
695.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
693.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
691.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
673.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
671.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
670.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
665.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
662.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
660.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
655.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
644.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
643.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
632.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
626.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
619.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
618.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
591.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
585.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
576.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
559.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
549.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
511.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
483.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
476.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
419.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.