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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Medium
Neuronal cells:
High
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
809.8
nTPM
HPA Brain:
271.2
nTPM
GTEx:
809.8
nTPM
FANTOM5:
90.5
Scaled Tags Per Million
Pig:
347.5
nTPM
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA051653
Glial cells
Medium
Neuronal cells
High
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
271.2
Sample id
Sample description
nTPM
Hippocampus nTPM: 265.4
2529
Female, age 94, left hemisphere
307.2
1898
Male, age 80, left hemisphere
305.6
2621
Female, age 67, right hemisphere
276.2
1911
Female, age 85, right hemisphere
250.3
2148
Female, age 91, left hemisphere
227.2
1855
Male, age 76, left hemisphere
226.0
Dentate gyrus nTPM: 253.5
2530
Female, age 94, left hemisphere
315.8
2246
Female, age 85, both hemispheres
260.0
1927
Female, age 91, both hemispheres
259.1
2010
Male, age 76, both hemispheres
246.9
2531
Female, age 67, both hemispheres
245.2
2528
Male, age 74, both hemispheres
194.2
Entorhinal gyrus nTPM: 245.3
2686
Male, age 75, right hemisphere
301.5
1938
Female, age 85, left hemisphere
253.6
2764
Male, age 80, right hemisphere
247.9
1787
Male, age 76, left hemisphere
243.2
2117
Female, age 91, right hemisphere
232.0
2613
Female, age 94, left hemisphere
193.4
Hippocampus, CA1 nTPM: 240.5
1873
Female, age 85, both hemispheres
258.0
2045
Male, age 76, both hemispheres
242.3
2749
Male, age 80, left hemisphere
238.9
2082
Female, age 91, right hemisphere
232.1
2527
Male, age 74, both hemispheres
231.2
Hippocampus, CA2 nTPM: 254.4
1892
Male, age 76, both hemispheres
283.0
1963
Male, age 80, left hemisphere
280.3
2437
Female, age 94, left hemisphere
273.2
1940
Female, age 85, left hemisphere
241.0
2113
Female, age 91, right hemisphere
226.7
2249
Male, age 74, both hemispheres
222.2
Hippocampus, CA3 nTPM: 231.7
1867
Male, age 76, both hemispheres
280.5
1891
Female, age 85, both hemispheres
260.7
2861
Female, age 67, both hemispheres
222.3
2436
Male, age 74, both hemispheres
221.9
2137
Male, age 80, left hemisphere
220.9
2620
Female, age 94, left hemisphere
183.9
Parahippocampal cortex nTPM: 240.3
2018
Male, age 76, both hemispheres
280.9
1850
Male, age 80, both hemispheres
270.6
2245
Female, age 91, both hemispheres
254.5
1933
Female, age 85, both hemispheres
253.6
1990
Female, age 91, right hemisphere
252.9
2250
Female, age 67, right hemisphere
247.7
2532
Female, age 72, left hemisphere
232.4
2692
Male, age 74, both hemispheres
221.8
2622
Female, age 67, right hemisphere
197.5
2693
Female, age 94, both hemispheres
191.3
Perirhinal gyrus nTPM: 271.2
1841
Female, age 85, right hemisphere
317.5
1847
Female, age 91, left hemisphere
308.4
1794
Male, age 80, right hemisphere
273.6
2848
Male, age 76, right hemisphere
235.7
2521
Female, age 94, right hemisphere
220.9
Subiculum nTPM: 265.6
2438
Female, age 94, left hemisphere
332.5
1977
Female, age 85, both hemispheres
283.3
2042
Male, age 76, both hemispheres
277.4
1901
Male, age 80, both hemispheres
265.1
2729
Female, age 91, right hemisphere
222.2
2619
Male, age 74, both hemispheres
213.0
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
809.8
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 809.8
Samples: 197
Max nTPM: 2885.7
Min nTPM: 397.8
Std nTPM: 285.5
Median nTPM: 745.8
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
2885.7
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
1954.5
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
1723.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
1652.8
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
1561.5
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
1480.4
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
1464.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
1389.0
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1368.8
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
1331.0
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
1269.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
1243.9
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
1235.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
1186.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
1158.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
1148.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
1134.4
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
1129.2
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
1105.3
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
1105.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
1085.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
1077.9
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
1066.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
1066.1
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
1065.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
1063.7
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
1060.9
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
1051.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
1051.4
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
1038.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
1035.0
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
1029.6
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
1024.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
1023.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
1013.0
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
1005.7
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
1004.7
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
1003.4
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
985.1
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
975.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
973.1
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
956.6
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
946.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
930.6
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
928.9
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
927.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
909.8
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
909.4
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
908.3
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
903.0
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
901.7
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
899.2
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
897.8
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
892.3
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
875.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
873.2
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
867.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
864.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
860.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
857.9
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
856.3
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
843.3
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
839.8
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
836.4
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
835.0
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
833.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
832.6
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
816.0
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
813.9
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
812.4
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
811.9
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
809.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
807.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
802.7
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
797.7
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
791.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
788.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
786.1
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
785.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
781.3
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
780.8
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
779.7
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
777.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
775.0
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
772.7
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
771.5
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
769.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
767.4
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
767.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
761.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
760.1
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
753.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
752.5
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
752.3
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
751.9
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
751.6
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
748.7
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
748.0
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
745.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
742.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
737.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
736.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
736.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
727.1
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
722.2
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
720.8
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
717.4
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
717.3
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
715.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
714.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
714.3
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
714.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
713.7
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
712.0
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
705.3
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
705.1
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
703.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
703.3
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
703.0
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
696.3
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
695.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
694.8
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
693.3
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
692.8
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
690.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
689.5
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
688.2
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
686.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
682.7
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
682.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
678.6
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
675.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
673.7
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
667.3
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
666.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
666.2
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
659.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
659.4
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
658.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
658.8
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
658.7
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
658.1
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
657.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
654.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
653.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
649.9
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
649.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
647.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
645.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
642.6
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
641.8
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
638.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
637.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
635.6
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
627.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
625.4
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
624.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
623.0
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
612.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
611.7
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
608.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
607.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
602.1
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
598.3
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
596.1
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
590.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
590.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
588.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
585.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
582.7
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
580.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
580.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
577.8
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
570.2
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
570.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
568.7
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
565.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
559.8
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
554.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
553.5
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
545.2
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
542.7
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
542.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
541.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
539.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
515.0
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
502.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
498.1
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
493.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
491.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
487.3
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
479.0
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
459.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
458.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
449.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
435.9
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
397.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.