HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:970.0 nTPM
HPA Brain:271.2 nTPM
GTEx:970.0 nTPM
FANTOM5:90.5 Scaled Tags Per Million
Pig:347.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051653
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 271.2
Sample id Sample description nTPM
Hippocampus
nTPM: 265.4
2529 Female, age 94, left hemisphere 307.2
1898 Male, age 80, left hemisphere 305.6
2621 Female, age 67, right hemisphere 276.2
1911 Female, age 85, right hemisphere 250.3
2148 Female, age 91, left hemisphere 227.2
1855 Male, age 76, left hemisphere 226.0
Dentate gyrus
nTPM: 253.5
2530 Female, age 94, left hemisphere 315.8
2246 Female, age 85, both hemispheres 260.0
1927 Female, age 91, both hemispheres 259.1
2010 Male, age 76, both hemispheres 246.9
2531 Female, age 67, both hemispheres 245.2
2528 Male, age 74, both hemispheres 194.2
Entorhinal gyrus
nTPM: 245.3
2686 Male, age 75, right hemisphere 301.5
1938 Female, age 85, left hemisphere 253.6
2764 Male, age 80, right hemisphere 247.9
1787 Male, age 76, left hemisphere 243.2
2117 Female, age 91, right hemisphere 232.0
2613 Female, age 94, left hemisphere 193.4
Hippocampus, CA1
nTPM: 240.5
1873 Female, age 85, both hemispheres 258.0
2045 Male, age 76, both hemispheres 242.3
2749 Male, age 80, left hemisphere 238.9
2082 Female, age 91, right hemisphere 232.1
2527 Male, age 74, both hemispheres 231.2
Hippocampus, CA2
nTPM: 254.4
1892 Male, age 76, both hemispheres 283.0
1963 Male, age 80, left hemisphere 280.3
2437 Female, age 94, left hemisphere 273.2
1940 Female, age 85, left hemisphere 241.0
2113 Female, age 91, right hemisphere 226.7
2249 Male, age 74, both hemispheres 222.2
Hippocampus, CA3
nTPM: 231.7
1867 Male, age 76, both hemispheres 280.5
1891 Female, age 85, both hemispheres 260.7
2861 Female, age 67, both hemispheres 222.3
2436 Male, age 74, both hemispheres 221.9
2137 Male, age 80, left hemisphere 220.9
2620 Female, age 94, left hemisphere 183.9
Parahippocampal cortex
nTPM: 240.3
2018 Male, age 76, both hemispheres 280.9
1850 Male, age 80, both hemispheres 270.6
2245 Female, age 91, both hemispheres 254.5
1933 Female, age 85, both hemispheres 253.6
1990 Female, age 91, right hemisphere 252.9
2250 Female, age 67, right hemisphere 247.7
2532 Female, age 72, left hemisphere 232.4
2692 Male, age 74, both hemispheres 221.8
2622 Female, age 67, right hemisphere 197.5
2693 Female, age 94, both hemispheres 191.3
Perirhinal gyrus
nTPM: 271.2
1841 Female, age 85, right hemisphere 317.5
1847 Female, age 91, left hemisphere 308.4
1794 Male, age 80, right hemisphere 273.6
2848 Male, age 76, right hemisphere 235.7
2521 Female, age 94, right hemisphere 220.9
Subiculum
nTPM: 265.6
2438 Female, age 94, left hemisphere 332.5
1977 Female, age 85, both hemispheres 283.3
2042 Male, age 76, both hemispheres 277.4
1901 Male, age 80, both hemispheres 265.1
2729 Female, age 91, right hemisphere 222.2
2619 Male, age 74, both hemispheres 213.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 970.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 970.0
Samples: 255

Max nTPM: 3303.1
Min nTPM: 459.5
Std nTPM: 321.0
Median nTPM: 897.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3303.1
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2204.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2184.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1884.6
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1818.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1790.7
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1767.2
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 1702.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1693.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1650.9
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 1634.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 90.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.5
FF:10153-102I9 76 years, female 90.6
FF:10169-103B7 60 years, female 90.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 347.5
Pig sample Sample description nTPM
Subiculum
nTPM: 316.0
Samples: 4

Max nTPM: 445.5
Min nTPM: 258.9
Sample A Female 445.5
Sample B Female 298.9
Sample C Male 258.9
Sample D Male 260.7
Dorsal hippocampus
nTPM: 347.5
Samples: 4

Max nTPM: 422.7
Min nTPM: 276.8
Sample A Female 422.7
Sample B Female 320.5
Sample C Male 370.1
Sample D Male 276.8
Entorhinal cortex
nTPM: 333.4
Samples: 4

Max nTPM: 420.6
Min nTPM: 258.6
Sample A Female 293.3
Sample B Female 420.6
Sample C Male 361.2
Sample D Male 258.6
Ventral hippocampus
nTPM: 294.9
Samples: 4

Max nTPM: 318.0
Min nTPM: 269.8
Sample A Female 318.0
Sample B Female 269.8
Sample C Male 304.0
Sample D Male 287.9

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo