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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: High
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:3027.7 nTPM
HPA:2952.1 nTPM
GTEx:3027.7 nTPM
FANTOM5:266.9 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA051653
Follicle cells High
Ovarian stroma cells Medium



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2952.1
overview
Female, age 64
Ovary sample 192
nTPM: 2087.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 3480.5
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 2497.8
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 2193.2
N/A
Female, age 16
Ovary sample 3663
nTPM: 6122.3
N/A
Female, age 20
Ovary sample 3664
nTPM: 2359.6
N/A
Female, age 32
Ovary sample 3665
nTPM: 1924

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3027.7
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 3027.7
Samples: 193

Max nTPM: 7702.3
Min nTPM: 1137.5
Std nTPM: 1295.2
Median nTPM: 2671.1
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 7702.3
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 7467.1
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 7317.6
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 6706.1
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 6643.6
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 6541.8
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 6484.1
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 5998.1
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 5980.0
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 5961.8
GTEX-183WM-1926-SM-72D5F 70-79 years, female 5770.5
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 5493.9
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 5403.7
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 5267.9
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 5254.2
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 5100.2
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 4998.7
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 4943.5
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 4851.8
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 4846.4
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 4807.0
GTEX-QVJO-3126-SM-COH22 60-69 years, female 4786.7
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 4686.7
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 4653.9
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 4503.7
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 4455.6
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 4404.6
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 4386.6
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 4252.5
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 4182.8
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 4071.1
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 4059.6
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 4042.5
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 3976.3
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 3973.4
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 3957.2
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 3951.1
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 3932.3
GTEX-15EOM-1526-SM-68723 20-29 years, female 3892.2
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 3890.9
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 3868.0
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 3865.0
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 3861.2
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 3836.3
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 3821.2
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 3651.1
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 3584.6
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 3573.9
GTEX-RU72-2226-SM-46MUE 50-59 years, female 3545.7
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 3502.0
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 3446.0
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 3442.1
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 3433.2
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 3429.3
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 3388.2
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 3372.7
GTEX-13SLX-2426-SM-664OM 50-59 years, female 3334.9
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 3320.0
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 3311.5
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 3268.1
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 3266.6
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 3259.3
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 3255.2
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 3228.2
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 3208.2
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 3199.9
GTEX-14BIN-1426-SM-664NI 50-59 years, female 3154.9
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 3151.3
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 3121.3
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 3115.9
GTEX-R45C-2526-SM-GRR28 60-69 years, female 3107.0
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 3051.7
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 3036.8
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 3016.7
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 3004.5
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 2992.5
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 2983.1
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 2975.6
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 2954.1
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 2938.8
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 2907.7
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 2875.6
GTEX-S32W-1226-SM-4AD67 50-59 years, female 2869.9
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 2858.8
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 2849.5
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 2849.3
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 2842.0
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 2837.7
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 2819.8
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 2812.9
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 2773.1
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 2748.5
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 2740.3
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 2729.7
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 2728.9
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 2720.6
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 2671.1
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 2659.8
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 2658.3
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 2627.2
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 2614.2
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 2594.8
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 2589.1
GTEX-11I78-1926-SM-59878 50-59 years, female 2575.6
GTEX-145ME-1226-SM-5MR87 40-49 years, female 2574.2
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 2568.1
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 2552.0
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 2548.2
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 2545.0
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 2544.4
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 2541.5
GTEX-S341-0726-SM-4AD5R 40-49 years, female 2539.7
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 2533.1
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 2523.3
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 2499.1
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 2492.1
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 2476.9
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 2464.9
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 2455.6
GTEX-14PKV-1226-SM-6871T 20-29 years, female 2451.0
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 2440.9
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 2435.4
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 2411.7
GTEX-P78B-1926-SM-3P616 40-49 years, female 2409.6
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 2365.3
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 2364.7
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 2350.0
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 2341.4
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 2339.6
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 2334.8
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 2329.0
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 2328.7
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 2320.2
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 2302.2
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 2282.1
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 2268.0
GTEX-18D9A-0826-SM-718C1 30-39 years, female 2259.2
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 2254.0
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 2252.5
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 2231.4
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 2225.6
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 2173.6
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 2157.8
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 2129.8
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 2116.8
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 2106.9
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 2103.5
GTEX-QCQG-1426-SM-48U22 50-59 years, female 2094.2
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 2093.7
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 2090.8
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 2076.5
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 2059.1
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 2041.8
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 2022.9
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 1984.6
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 1976.6
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 1967.0
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 1929.3
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 1926.5
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 1914.9
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 1910.2
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 1906.8
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 1900.4
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 1900.1
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 1895.7
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 1895.3
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 1886.9
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 1855.7
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 1837.6
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 1823.3
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 1756.7
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 1752.7
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 1742.0
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 1722.4
GTEX-Q734-0726-SM-48TZP 40-49 years, female 1696.1
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 1690.0
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 1673.6
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 1639.5
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 1615.5
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 1607.1
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 1601.9
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 1570.4
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 1522.0
GTEX-14JG6-0626-SM-68716 30-39 years, female 1518.5
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 1505.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1492.7
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 1428.2
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 1369.3
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1301.7
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 1264.0
GTEX-R55G-1526-SM-48FER 40-49 years, female 1231.2
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1140.6
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1137.5
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

266.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 266.9
FF:10020-101D2 47,75,84 years, female 266.9

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