HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:39.1 nTPM
HPA Brain:25.5 nTPM
GTEx:39.1 nTPM
FANTOM5:40.3 Scaled Tags Per Million
Pig:43.3 nTPM
Mouse:5.3 nTPM
Allen mouse:4.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007674
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.5
Sample id Sample description nTPM
Hippocampus
nTPM: 25.0
1898 Male, age 80, left hemisphere 32.1
2621 Female, age 67, right hemisphere 27.9
1855 Male, age 76, left hemisphere 25.7
2148 Female, age 91, left hemisphere 25.2
2529 Female, age 94, left hemisphere 20.1
1911 Female, age 85, right hemisphere 18.9
Dentate gyrus
nTPM: 23.3
2530 Female, age 94, left hemisphere 34.5
2010 Male, age 76, both hemispheres 27.3
2528 Male, age 74, both hemispheres 20.4
1927 Female, age 91, both hemispheres 20.3
2246 Female, age 85, both hemispheres 19.7
2531 Female, age 67, both hemispheres 17.5
Entorhinal gyrus
nTPM: 23.3
2117 Female, age 91, right hemisphere 26.4
2613 Female, age 94, left hemisphere 24.5
1938 Female, age 85, left hemisphere 23.7
1787 Male, age 76, left hemisphere 22.9
2686 Male, age 75, right hemisphere 22.4
2764 Male, age 80, right hemisphere 19.9
Hippocampus, CA1
nTPM: 23.9
2749 Male, age 80, left hemisphere 31.6
1873 Female, age 85, both hemispheres 25.5
2527 Male, age 74, both hemispheres 23.5
2045 Male, age 76, both hemispheres 21.5
2082 Female, age 91, right hemisphere 17.5
Hippocampus, CA2
nTPM: 24.5
1963 Male, age 80, left hemisphere 29.8
1892 Male, age 76, both hemispheres 27.6
2249 Male, age 74, both hemispheres 27.3
1940 Female, age 85, left hemisphere 22.9
2437 Female, age 94, left hemisphere 19.9
2113 Female, age 91, right hemisphere 19.7
Hippocampus, CA3
nTPM: 25.5
2436 Male, age 74, both hemispheres 31.5
2137 Male, age 80, left hemisphere 30.1
1867 Male, age 76, both hemispheres 24.3
2620 Female, age 94, left hemisphere 23.9
2861 Female, age 67, both hemispheres 22.1
1891 Female, age 85, both hemispheres 21.4
Parahippocampal cortex
nTPM: 20.5
1850 Male, age 80, both hemispheres 24.8
1990 Female, age 91, right hemisphere 23.6
2692 Male, age 74, both hemispheres 23.5
2245 Female, age 91, both hemispheres 23.3
1933 Female, age 85, both hemispheres 23.1
2532 Female, age 72, left hemisphere 21.5
2250 Female, age 67, right hemisphere 19.0
2622 Female, age 67, right hemisphere 16.5
2693 Female, age 94, both hemispheres 15.5
2018 Male, age 76, both hemispheres 14.5
Perirhinal gyrus
nTPM: 22.9
1794 Male, age 80, right hemisphere 26.3
1847 Female, age 91, left hemisphere 24.6
1841 Female, age 85, right hemisphere 24.5
2521 Female, age 94, right hemisphere 19.4
2848 Male, age 76, right hemisphere 19.4
Subiculum
nTPM: 22.1
1977 Female, age 85, both hemispheres 24.0
1901 Male, age 80, both hemispheres 23.8
2619 Male, age 74, both hemispheres 22.9
2042 Male, age 76, both hemispheres 22.3
2729 Female, age 91, right hemisphere 21.3
2438 Female, age 94, left hemisphere 18.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 39.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.1
Samples: 255

Max nTPM: 72.3
Min nTPM: 21.5
Std nTPM: 8.3
Median nTPM: 38.8
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 72.3
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 63.6
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 63.4
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 59.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 58.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 58.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 57.2
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 56.2
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 55.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 55.3
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 54.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 40.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.3
FF:10153-102I9 76 years, female 47.3
FF:10169-103B7 60 years, female 33.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 43.3
Pig sample Sample description nTPM
Subiculum
nTPM: 34.5
Samples: 4

Max nTPM: 44.5
Min nTPM: 30.3
Sample A Female 44.5
Sample B Female 30.7
Sample C Male 32.5
Sample D Male 30.3
Dorsal hippocampus
nTPM: 43.3
Samples: 4

Max nTPM: 58.4
Min nTPM: 32.9
Sample A Female 58.4
Sample B Female 40.3
Sample C Male 41.6
Sample D Male 32.9
Entorhinal cortex
nTPM: 32.4
Samples: 4

Max nTPM: 38.6
Min nTPM: 27.8
Sample A Female 38.6
Sample B Female 32.3
Sample C Male 30.9
Sample D Male 27.8
Ventral hippocampus
nTPM: 41.3
Samples: 4

Max nTPM: 48.6
Min nTPM: 27.7
Sample A Female 44.8
Sample B Female 27.7
Sample C Male 48.6
Sample D Male 44.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 5.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.5
Samples: 4

Max nTPM: 3.7
Min nTPM: 1.4
Sample A Male 1.8
Sample B Male 3.7
Sample C Female 1.4
Sample D Female 3.1
Hippocampal formation
nTPM: 5.3
Samples: 4

Max nTPM: 7.7
Min nTPM: 2.6
Sample A Male 2.6
Sample B Male 7.7
Sample C Female 6.9
Sample D Female 3.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
68300950 Antisense, RP_041129_02_E01, Mouse strain C57BL/6J (56 days, male) 4.7

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