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  • TISSUE

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  • RTN4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:334.3 nTPM
HPA Brain:564.0 nTPM
GTEx:334.3 nTPM
Pig:404.8 nTPM
Mouse:334.3 nTPM
Allen mouse:16.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

564.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 362.2
2226 Male, age 75, left hemisphere 409.1
1961 Female, age 42, unknown 315.3
Dorsomedial nucleus
nTPM: 400.0
1989 Male, age 62, unknown 421.4
2041 Female, age 72, unknown 394.3
2017 Female, age 42, unknown 384.2
Lateral hypothalamic area
nTPM: 564.0
2271 Male, age 75, both hemispheres 628.8
2228 Male, age 66, unknown 613.4
1791 Male, age 80, right hemisphere 566.2
2412 Male, age 62, unknown 447.6
Mammillary body
nTPM: 562.5
1923 Female, age 72, unknown 636.7
1948 Female, age 72, unknown 602.8
1945 Male, age 80, right hemisphere 552.0
1834 Female, age 42, unknown 516.8
2413 Male, age 66, unknown 504.2
Paraventricular nucleus
nTPM: 510.1
2700 Male, age 62, unknown 510.1
Preoptic area
nTPM: 465.5
2414 Female, age 72, unknown 480.0
1907 Male, age 80, right hemisphere 468.0
1861 Female, age 42, unknown 448.4
Supraoptic nucleus
nTPM: 487.2
2043 Male, age 62, unknown 528.8
2835 Female, age 72, unknown 491.5
1894 Female, age 72, unknown 441.4
Ventromedial nucleus
nTPM: 345.1
1982 Female, age 72, unknown 370.0
1822 Female, age 42, unknown 320.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

334.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 334.3
Samples: 257

Max nTPM: 797.5
Min nTPM: 147.4
Std nTPM: 94.6
Median nTPM: 321.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 797.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 746.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 647.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 607.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 568.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 544.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 537.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 536.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 532.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 532.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 532.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 517.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 517.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 502.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 496.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 491.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 491.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 483.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 482.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 480.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 473.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 473.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 473.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 472.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 469.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 456.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 451.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 450.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 449.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 444.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 439.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 436.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 432.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 426.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 425.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 423.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 421.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 419.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 413.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 412.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 408.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 408.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 405.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 405.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 403.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 402.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 401.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 400.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 400.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 397.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 396.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 396.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 395.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 395.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 394.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 393.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 392.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 391.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 391.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 389.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 387.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 383.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 381.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 379.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 377.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 376.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 376.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 375.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 374.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 373.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 372.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 370.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 370.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 370.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 368.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 367.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 366.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 366.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 365.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 365.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 365.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 363.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 363.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 363.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 359.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 357.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 357.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 355.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 354.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 353.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 350.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 350.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 349.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 349.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 347.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 347.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 347.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 346.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 344.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 344.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 343.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 343.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 342.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 341.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 341.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 340.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 339.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 339.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 339.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 338.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 338.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 337.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 336.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 335.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 334.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 332.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 331.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 330.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 329.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 329.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 328.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 326.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 326.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 324.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 324.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 323.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 322.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 321.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 321.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 320.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 320.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 320.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 319.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 318.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 318.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 318.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 318.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 316.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 315.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 315.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 314.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 312.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 311.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 310.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 309.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 309.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 309.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 308.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 306.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 306.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 305.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 303.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 303.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 303.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 303.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 303.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 301.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 299.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 299.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 297.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 297.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 296.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 295.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 295.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 295.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 295.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 295.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 294.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 294.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 294.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 293.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 291.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 290.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 289.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 289.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 287.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 285.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 285.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 285.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 284.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 282.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 281.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 279.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 278.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 277.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 276.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 275.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 275.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 274.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 273.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 273.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 272.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 271.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 271.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 269.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 268.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 267.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 266.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 266.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 265.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 265.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 264.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 264.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 264.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 257.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 256.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 254.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 254.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 253.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 253.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 251.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 249.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 249.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 248.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 248.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 247.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 247.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 246.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 246.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 244.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 242.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 239.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 238.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 237.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 237.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 236.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 236.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 235.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 233.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 233.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 231.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 229.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 228.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 227.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 225.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 224.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 221.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 220.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 220.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 215.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 215.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 214.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 211.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 209.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 207.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 203.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 199.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 198.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 197.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 188.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 184.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 181.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 179.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 165.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 161.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 155.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 147.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

404.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 404.8
Samples: 4

Max nTPM: 525.7
Min nTPM: 318.5
Sample A Female 525.7
Sample B Female 431.5
Sample C Male 343.5
Sample D Male 318.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

334.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 334.4
Samples: 4

Max nTPM: 345.1
Min nTPM: 322.4
Sample A Male 322.4
Sample B Male 336.0
Sample C Female 345.1
Sample D Female 333.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 16.3
70805906 Antisense, RP_050725_02_E03, Mouse strain C57BL/6J (56 days, male) 16.8
68162204 Antisense, RP_041122_01_G02, Mouse strain C57BL/6J (56 days, male) 15.8

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