HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:53.6 nTPM
HPA Brain:167.1 nTPM
GTEx:53.6 nTPM
FANTOM5:119.4 Scaled Tags Per Million
Pig:69.9 nTPM
Mouse:72.4 nTPM
Allen mouse:14.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004189Antibody CAB026457
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 167.1
Sample id Sample description nTPM
Hippocampus
nTPM: 162.7
1898 Male, age 80, left hemisphere 177.4
1855 Male, age 76, left hemisphere 167.5
2529 Female, age 94, left hemisphere 160.2
2148 Female, age 91, left hemisphere 158.6
2621 Female, age 67, right hemisphere 157.5
1911 Female, age 85, right hemisphere 155.2
Dentate gyrus
nTPM: 159.0
2010 Male, age 76, both hemispheres 184.7
2530 Female, age 94, left hemisphere 167.4
2246 Female, age 85, both hemispheres 155.9
1927 Female, age 91, both hemispheres 152.8
2528 Male, age 74, both hemispheres 149.0
2531 Female, age 67, both hemispheres 144.2
Entorhinal gyrus
nTPM: 146.8
2764 Male, age 80, right hemisphere 150.0
2686 Male, age 75, right hemisphere 149.8
1938 Female, age 85, left hemisphere 148.5
2117 Female, age 91, right hemisphere 147.0
2613 Female, age 94, left hemisphere 143.7
1787 Male, age 76, left hemisphere 142.1
Hippocampus, CA1
nTPM: 162.7
2749 Male, age 80, left hemisphere 193.7
1873 Female, age 85, both hemispheres 163.1
2082 Female, age 91, right hemisphere 155.7
2527 Male, age 74, both hemispheres 152.2
2045 Male, age 76, both hemispheres 149.0
Hippocampus, CA2
nTPM: 162.0
1963 Male, age 80, left hemisphere 203.0
1940 Female, age 85, left hemisphere 164.0
2249 Male, age 74, both hemispheres 159.8
2113 Female, age 91, right hemisphere 157.5
1892 Male, age 76, both hemispheres 148.9
2437 Female, age 94, left hemisphere 139.0
Hippocampus, CA3
nTPM: 167.1
2436 Male, age 74, both hemispheres 227.6
2137 Male, age 80, left hemisphere 173.4
1891 Female, age 85, both hemispheres 156.4
1867 Male, age 76, both hemispheres 154.6
2861 Female, age 67, both hemispheres 145.9
2620 Female, age 94, left hemisphere 145.1
Parahippocampal cortex
nTPM: 149.7
2018 Male, age 76, both hemispheres 169.7
1850 Male, age 80, both hemispheres 162.6
2532 Female, age 72, left hemisphere 154.6
1933 Female, age 85, both hemispheres 149.3
2692 Male, age 74, both hemispheres 148.8
2245 Female, age 91, both hemispheres 148.1
1990 Female, age 91, right hemisphere 145.9
2622 Female, age 67, right hemisphere 144.7
2693 Female, age 94, both hemispheres 137.8
2250 Female, age 67, right hemisphere 135.6
Perirhinal gyrus
nTPM: 152.8
1847 Female, age 91, left hemisphere 167.8
1794 Male, age 80, right hemisphere 156.2
2521 Female, age 94, right hemisphere 155.1
1841 Female, age 85, right hemisphere 150.0
2848 Male, age 76, right hemisphere 134.8
Subiculum
nTPM: 154.3
2042 Male, age 76, both hemispheres 163.5
2438 Female, age 94, left hemisphere 157.2
1977 Female, age 85, both hemispheres 154.3
2729 Female, age 91, right hemisphere 153.7
2619 Male, age 74, both hemispheres 149.1
1901 Male, age 80, both hemispheres 148.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 53.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.6
Samples: 255

Max nTPM: 83.4
Min nTPM: 37.0
Std nTPM: 8.6
Median nTPM: 53.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 83.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 79.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 77.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 77.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 76.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 75.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 71.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 71.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 70.6
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 70.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 70.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 119.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.4
FF:10169-103B7 60 years, female 120.4
FF:10153-102I9 76 years, female 118.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 69.9
Pig sample Sample description nTPM
Subiculum
nTPM: 66.5
Samples: 4

Max nTPM: 81.6
Min nTPM: 58.6
Sample A Female 81.6
Sample B Female 58.6
Sample C Male 65.3
Sample D Male 60.6
Dorsal hippocampus
nTPM: 65.8
Samples: 4

Max nTPM: 80.6
Min nTPM: 53.6
Sample A Female 80.6
Sample B Female 68.5
Sample C Male 60.6
Sample D Male 53.6
Entorhinal cortex
nTPM: 67.9
Samples: 4

Max nTPM: 73.4
Min nTPM: 61.4
Sample A Female 73.4
Sample B Female 68.4
Sample C Male 68.4
Sample D Male 61.4
Ventral hippocampus
nTPM: 69.9
Samples: 4

Max nTPM: 89.1
Min nTPM: 49.8
Sample A Female 70.7
Sample B Female 49.8
Sample C Male 89.1
Sample D Male 70.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 72.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.4
Samples: 4

Max nTPM: 75.8
Min nTPM: 70.9
Sample A Male 71.1
Sample B Male 70.9
Sample C Female 71.9
Sample D Female 75.8
Hippocampal formation
nTPM: 68.1
Samples: 4

Max nTPM: 72.9
Min nTPM: 60.8
Sample A Male 60.8
Sample B Male 67.1
Sample C Female 72.9
Sample D Female 71.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.3
74819232 Antisense, RP_060315_02_B08, Mouse strain C57BL/6J (56 days, male) 16.0
77932809 Antisense, RP_070320_02_C02, Mouse strain C57BL/6J (56 days, male) 12.5

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